| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3101 |
|---|
| Symbol | pcnB |
|---|
| ID | 3725808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 3617327 |
|---|
| End bp | 3618655 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637752712 |
|---|
| Product | poly(A) polymerase |
|---|
| Protein accession | YP_358506 |
|---|
| Protein GI | 77920691 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 7.87683e-19 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC AAGCAGTTGA GCCTATGATT ATGACTGAAC CGGACAAGGA AATGGATACC
GGCGCACAGG GCCCTGTAAT CGTGCCCCGT TCACAACATT CCATTTCCCG CAAACACATC
AACGAACATA GTCTCAAAGT CCTGTACCGG CTGCGCAATC ACGGTTTCAA GGCTTATCTG
GTCGGCGGAG GCGTACGTGA CCTGCTTCTG AATCGGCGCC CCAAGGATTT CGATGTAGCG
ACCGATGCCA CCCCGTCGCA GGTCAAAAAA CTGTTCCGCA ACTGCTTCCT GGTCGGCCGG
CGGTTTCGCC TGGCCCATAT CCGGTTTGCC GAAAACTACG TCGTCGAAGT CGCCACCTTC
CGGCGGCAAC CGCGCCCCGA GGAACTGCCG GACGATCCGG CGGAACATTT CTTCTTTACC
GAAAACGTGT TCGGCACGCC GCGCGAAGAT GCCTTTCGCC GCGACTTTTC CATCAACGGA
CTGTTTTACA ACATCGACGA TTTTTCCGTC ATCGACCACG TCGGCGGGCT CCAGGATCTG
GAAGCCAGAC GCTTGCGGGT CATCGGCGAT CCGTTGGTGC GATTCACCGA GGATCCGGTC
CGCATGTTGC GGGCTCTGGA GTTTGCCGCG CGCCTGGGCT TTTCCCTCGA CGAAGGGATT
CGGGAAGCCA TCTATCTGCG CGGCCCCCTG ATTGCGGAAG CAGCGCCGGC CCGGATTCGC
GAGGAAGTGA TGGAACTGTT TCGGCACGCG GTGGCGGGGC CGGTGTTCCG CGAAGCCCAG
GCCATGGGGC TGCTGAGCCA CCTGCTGGCC GGTTACGAGG TAACCGAGGA AACCCTGGCG
CTGCTGGAAG GCGTCGACCG GCGCACCGGC AAAGGTGCCG CCGTGGAAGA ATCGCTGGTA
CTGGCGACCC TGTTTCTGGC ACGCTTTCGC CATGCCCTGC CGACAGACGA TGAAGCCACG
ATAGGCAACG CCTTGCAGCT GGCCAATCTG CTGCTCACCC CCATGTGCGC CTATTTCCGC
ATCGCCCACG GAACCCGTGC CCGTGCCCGG GACCTGCTCA TCGGTTTCTT CCGTCTCAGC
CGAGGCCGCG GTCGGCGGGG CGAGGCCCGC TTCCTGCGTC ACACCAGCTC CGTGCAAGCA
CTGGAGTTCT TTGCCCTCTG GTGCGAAACC ACGCAGCAGC AACTCGATCT GCTGGCGGAC
TGGCGGCTGG CTTTTGCCGG CACCGAGGCC CCGTCCGCCA AAAGTAGCAA ACCCAGCCGT
CGCCGTCCTC GCCGCCGGCG GCGAAGCGGG CAACGACGGT CGCCTAAGCC GGCTCCCAAG
GCGGACTAG
|
|---|
| Protein sequence | MKIQAVEPMI MTEPDKEMDT GAQGPVIVPR SQHSISRKHI NEHSLKVLYR LRNHGFKAYL
VGGGVRDLLL NRRPKDFDVA TDATPSQVKK LFRNCFLVGR RFRLAHIRFA ENYVVEVATF
RRQPRPEELP DDPAEHFFFT ENVFGTPRED AFRRDFSING LFYNIDDFSV IDHVGGLQDL
EARRLRVIGD PLVRFTEDPV RMLRALEFAA RLGFSLDEGI REAIYLRGPL IAEAAPARIR
EEVMELFRHA VAGPVFREAQ AMGLLSHLLA GYEVTEETLA LLEGVDRRTG KGAAVEESLV
LATLFLARFR HALPTDDEAT IGNALQLANL LLTPMCAYFR IAHGTRARAR DLLIGFFRLS
RGRGRRGEAR FLRHTSSVQA LEFFALWCET TQQQLDLLAD WRLAFAGTEA PSAKSSKPSR
RRPRRRRRSG QRRSPKPAPK AD
|
|---|
| |