| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3099 |
|---|
| Symbol | |
|---|
| ID | 3725806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3614960 |
|---|
| End bp | 3616267 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637752710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358504 |
|---|
| Protein GI | 77920689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.000382342 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGC CTGTCGCTGT CCAACGCTAC CTGGAAAAAC GTGCGCTAAC CCACCCGTGG
CGTATTGAGG GGGCTTTGCG CCACGACTAT CGGGGCGCGG TGGTGATCCC GGCACTGGCC
GAAAGCGCCC ATCTGTTCGC CACCTTGGCC AGCCTGCAGG CCAATCCGGC CTCTGTGCTT
GAAGAGTTTC TGGTGGTTGT GGTGGTCAAT CAGCGACAGG ACGCTGCCGC AAGCGATAAA
CAGGATAATG ACCTGACCTT ACGGAAATTG AGGGAGTCGC TCGGGTTTTT GCCCCATCTG
GGTTGGGTCG ATGCTGCTGC CGACGGGTTG GAACTGCCTG GCAAAGGCGG TGTGGGGCTG
GCGCGCAAAA TCGGTCTCGA TCTGGTGCTG CAGCGACTGG ACTGGGCGGC GGGTCCGATC
CTGGCGAATC TCGATGCCGA CACCCTGGTC CGAGACGATT ACCTGCCGGC TTTAAAGGCC
CATTTCGCCA TCGCCGAAGC CGGCGGAGCG GTGGTGCCCT TTTGTCATCC GGTCACCGGC
GAAAAGGCGC AGCAGCAGGC CATGATAGCC TACGAACTCT ATCTGCGCGG GCATGTGCTC
GGTCTGCAAT GGGCCGGCTC GCCCTATGCT TTTCACACCG TCGGCAGCAC CATGGTCTGT
CGTGCTGACG ACTATGTGCG ATCCGGTGGC ATGAACCGCC GCCAGGCCGG CGAAGATTTC
TATTTTTTAC AGCAACTGGC CAAAACCTCG GGGGTTGGCG GTGTCGTCGA TACGGTGGTT
TACCCCTCGG CGCGGATTTC GCAGCGCACG CCTTTTGGCA CCGGGCGTAG CGTGGCGCAG
CTGGCGTCGG ATGGGAGTGC GCCACGGCTT TACTACGATC CTCGCTGTTA CGAGATGCTG
CATGACTGGC TGCAGCTGGT GTCTGCCCAC TGGCAAACCG ACGGTGGGGA AATCCTTGAG
CAGGCAGGAG TTATCAGTGA ATTGCTGGCG GGGTTTTTGC GTAAAGAGAA CTTTCAGGAG
ACGTGGCCGC GGCTGTGTCG CAATCATGCC GATCGCCAAA GCCGTCTGAA GGCATTCCAT
GGCTGGTTCG ACGGATTGAA AACGACGCGA CTGATCCACT ATCTGACCGA TGCCGGCTGG
CCACGCCAAG CGGCAGCCGA GGCCATAGCG CCTCTGTTGC GGCGGGTCGG TCTGCCAGCG
GTTGACGAGC CGCAAAAACA GCTGATGCTA TTACGGCAGC GGCAAATCGG CACGCCTTGT
GCTTCTTGCA GGTTGTCTGA AAAATCGAAT TGTTGTAGGG TGGCGTGA
|
|---|
| Protein sequence | MSLPVAVQRY LEKRALTHPW RIEGALRHDY RGAVVIPALA ESAHLFATLA SLQANPASVL
EEFLVVVVVN QRQDAAASDK QDNDLTLRKL RESLGFLPHL GWVDAAADGL ELPGKGGVGL
ARKIGLDLVL QRLDWAAGPI LANLDADTLV RDDYLPALKA HFAIAEAGGA VVPFCHPVTG
EKAQQQAMIA YELYLRGHVL GLQWAGSPYA FHTVGSTMVC RADDYVRSGG MNRRQAGEDF
YFLQQLAKTS GVGGVVDTVV YPSARISQRT PFGTGRSVAQ LASDGSAPRL YYDPRCYEML
HDWLQLVSAH WQTDGGEILE QAGVISELLA GFLRKENFQE TWPRLCRNHA DRQSRLKAFH
GWFDGLKTTR LIHYLTDAGW PRQAAAEAIA PLLRRVGLPA VDEPQKQLML LRQRQIGTPC
ASCRLSEKSN CCRVA
|
|---|
| |