Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_3092 |
Symbol | cydB |
ID | 3725799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3606416 |
End bp | 3607444 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637752703 |
Product | cytochrome d ubiquinol oxidase, subunit II |
Protein accession | YP_358497 |
Protein GI | 77920682 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000000000582021 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTTC AGGTGATCTG GTTTGCCCTG TGGGGTTTGT TGTGGGCCCT GTACTTTATG CTCGACGGAT TTACCCTCGG GGCCGGTATG CTGCACAAAT TCATCGCCCG CGACGACGCG CAGCGTCAAC AGGTGATCCG CACTTTCGGC CCGGTCTGGG ACGGTAACGA GGTCTGGCTG ATCACGGCAG GCGGCGCCAC CTTCGCGGCC TTTCCCACCA CCTATGCGCT GATGTTCAGT TACCTGTATG CCCCGTTGCT GCTGTTGCTG TTCGGCCTCA TCGTGCGCGG CGTCTCCTTT GAGTTTCGCG GCCTGAACCC CGGACCGGGC TGGAGAAACG GTTGGGACTG GGCCATCGTT CTGTCCAGTC TGGTCATTAC CCTGCTGTTC GGAGTGGCCT TCGGCAACAT CTTCCGGGGG TTGCCCATGG ATGCCGCCGG CTATCACGGC TCGCTGCCGG CGCTGCTCAA CCCTTATGGG CTTTTGACCG GGGTGCTTTT CATCATGCTG TTTCTGCAGC ACGGTGCGCT GTATCTGGCC ATCAAGACCA GCGGCGATCT GCAGGAAAGG GCAAAACGCA CAGCCCGCAC CCTTTGGCCC TATATGCTGG CGACCGCCGT CGCCTTTCTG GCCTTCACCG CGCCGGCTAC GGCCTTGTAC GAAAACTTTC AAGCCTCGCC GTCGTTATGG GTGGTGCCGC TGATGGCGGC ATTGGAACTG CTGGCGGTGC GCCTTTTGGT CGCGCAGAAC AAATGGCTGC AGGCCTTCGC CGCATCCTGC GCCGCCATCG TGCTGGTGGT GGCAACCGGC ATCATCGGGC TGTTCCCGAA CCTTATCCCC TCCAGCCTCG ATCCGGCCTA CAGCCTGAGC CTGTCCAACT CCTCCTCAAG CCCTTACACC TTGCATATCA TGACGGTGGT GGTGGCCATC TTTGTGCCCA TCGTCATCGC CTACAAGATC TGGATCTACC GCATCTTCCG CGGCCCGGTC AGTGACGCAG CCGAAGAAGG TATCGGCGGT AATTACTGA
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Protein sequence | MTLQVIWFAL WGLLWALYFM LDGFTLGAGM LHKFIARDDA QRQQVIRTFG PVWDGNEVWL ITAGGATFAA FPTTYALMFS YLYAPLLLLL FGLIVRGVSF EFRGLNPGPG WRNGWDWAIV LSSLVITLLF GVAFGNIFRG LPMDAAGYHG SLPALLNPYG LLTGVLFIML FLQHGALYLA IKTSGDLQER AKRTARTLWP YMLATAVAFL AFTAPATALY ENFQASPSLW VVPLMAALEL LAVRLLVAQN KWLQAFAASC AAIVLVVATG IIGLFPNLIP SSLDPAYSLS LSNSSSSPYT LHIMTVVVAI FVPIVIAYKI WIYRIFRGPV SDAAEEGIGG NY
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