| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3055 |
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| Symbol | |
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| ID | 3725762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3567197 |
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| End bp | 3569740 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637752666 |
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| Product | sensory box-containing protein |
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| Protein accession | YP_358460 |
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| Protein GI | 77920645 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATT CTCCTGCCAA AAAGTCCTTG CGTCCCGAAG AACCCGCCCC TCACACATCC
CAGGTGCCCA CCGGGTCGTT TGAATGTCCG ATTTGTGCGC GTGATTTTGC CGGATCAGGT
GTCTCTGAAG GGACCTTCCA AGAAACTGGC GCGCTGCATC TGGCTTTTAT GGAGTCTTCC
ATCGATGGCA TCGTCATTAT GGATGGTGCA TCCGGCGGTG TCGTCGAGGC CAATGCGGCC
TTCGCCGAAA TGCTCGGCTA CAGCATGGAA GAACTTCGTC GCTTGCATGT CTGGGATTGG
GATGCCCAGT GGTCCAAGGA CGAACTCCGA TTGATCATTG CAAATACCGG TTTTTCGAAT
CAGCGGTTCG AAACCCGGCA TCGGCGTAAA GACGGGCAGA TTCTGGATGT GGAGATCAGT
GCCACCAAAA TCCAATGGTT GGACAAGCTC TTTGTTTTTT GTGTCGTCAA AGATATCAGC
CAACAAAAGC TCCAACAGCA GAGACTGCAA CAGGAACTCA CCCTGTGGCA GTTGCTGATG
GAACGCAGCA AGGGGGGCAT CGCTGTTATT GATGGGGAAA CCCTAAAGGT TCTCGATGTC
AATCCCGCTT TTGCTGAGAT GCTCGGCTAT GAACCGGGGG AGATGCTGGG TATGCACCCC
TGGGAATGGG ACGCATGCCG CAGTCGTGCG CAAATAGAAT CGAGAGCATT CTCCTCTCAG
GTTTCCTACG AAGAATACTT CTTTGAAACC ATCATGAAAC GCAAAGACGG CACTCTGCGG
AATGTGGAGG TGAACAGTCT GCCCATGATG GTGGGCGATA GAAAACATGT TTTTTGCCTC
TGTCGGGACA TCACGGAACG CTGCGAGGCC AATAAAGCTT TGCTTGCCAG GGAACAGGAC
TTTCGCAGCC TGGCCGAGAA TGCCCCCGAT GCCATCGTGC GCTATGACCG CCAATTGCGT
CGTCTGTATA TCAATCCGGT TCTTGAGCGT CTGCTCGGTC AGGATAAAGC AACTCTGCTC
GGTAAGCCCT TTGAAAACCA TGCGCCTGTG GATATGACGG CTTATCAGGA TGCTCTTGAA
AAGACTTTCC AAACCGGCCT CCAGCAAGTG ACCGAGGTTC AGTATCCCCT GCCTGACGGT
ACGCTCGGCT GGTTTCACGC GCGTTTTGAG CCGGAATTTG CCGAGGATGC AACCGTTAAA
TCCGTTATGG GCATCGTTCG CGATATCACC GAGCTGGTCG AGCAGCGGGA ACTGGCGCAA
CACCTGGCGT TTACCGATAT GCTGACCGGG CTGCCGAATC GGGCCTTGTT TGAAAAGCGT
TTTAAAGAGG CTGCCGCCGA AGCGAAAAGT ACCGACTGTC CCTTTGCTCT GCTGATGTTG
GATCTCGATC ATTTCAAAGA TGTCAATGAC TCCCTGGGCC ATAACTGCGG GGATGAGCTG
CTGCGTCAGG TGACCGCGCG CCTGTCCCAC TGTGTCAACG AATGCGATAC CATTGCCCGC
ATGGGCGGGG ATGAGTTCGC CATTCTACTG GCTGAGAGCC GAGGCAGCGA TGAGGCCGGC
CAGGTCGCGG ATCTGATTCT CAGCACACTG GCCCAGCCTT TTTTCATCGA ATCTCAGGAA
CTGTTCATCT CCGGCAGCAT CGGCATCGCT TTCTTTCCCC ATGATAGTGC CAATCTTGAC
GAGTTATTCA CCTACGCCGA TACCGCCATG TACAGCGCCA AGCACAAGGG ACGCAACAAT
TTCCAGTGCT ACGACCAGGA ACTCACCCGC CATGTCTCCG CGAAGTTGTC CCTTGGCGCT
TCGCTGCGCT ATGCCTGTGT CAACCATGAA CTGCAGCTTT ATTATCAGCC CAAGGTTCAA
CTGAAGGATG GTCGGGTTGT CGGTGTGGAG GCTTTGCTGC GCTGGTGGCA TCCCGTGCTG
GGCATGTTGA CGCCGGATCG CTTCATCTCC ATTGCCGAGG AGACCGGCCT GATCGTCGAA
ATCGGCGAAT GGGTATTGAA AACCGCCTGC CAGGCGGCGG TTGATTTCAA CCGGAATGCC
ACCGCCCCGT TCAAGGTGGC GGTCAACCTC TCCTGCCGGC AGTTTCTGCA GAATGATCTG
GCCGCTACCA TCGAGGCCAT TCTGAAAACC ACCGGCTGTC GGGGGGAATG GCTGGAGTGC
GAGATCACCG AAAGCCTGAT GATCGAGGAC AACCCCCAGG TAGCGAAGAC TCTCGAAGCC
CTGCGCTCTC TCGGCATCAC CATCGCCATC GATGATTTCG GTACCGGTTA TTCGGCCTTG
AATTATCTCT CCCGGTTTCC CATCGACGTC CTCAAAATAG ACCGCTCGTT TATCAACCAT
ATCGACACCG ACCCCTGCAA GGTCGGCCTG GTCAAGGTCT TCATCGCCCT GGGAACCAAC
CTCGAAATGC AGATTGTGGC GGAAGGTGTG GAGACCGTAT CCGAGTCGGC CTCTCTGCAA
AAACTGGGTT GTGGCCTCGC CCAGGGCTAT CTTTTCGGCA AGCCCCAGCC TTTTAAAGCC
CTGATGGCAA CGCTGTCGCT TTGA
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| Protein sequence | MSDSPAKKSL RPEEPAPHTS QVPTGSFECP ICARDFAGSG VSEGTFQETG ALHLAFMESS
IDGIVIMDGA SGGVVEANAA FAEMLGYSME ELRRLHVWDW DAQWSKDELR LIIANTGFSN
QRFETRHRRK DGQILDVEIS ATKIQWLDKL FVFCVVKDIS QQKLQQQRLQ QELTLWQLLM
ERSKGGIAVI DGETLKVLDV NPAFAEMLGY EPGEMLGMHP WEWDACRSRA QIESRAFSSQ
VSYEEYFFET IMKRKDGTLR NVEVNSLPMM VGDRKHVFCL CRDITERCEA NKALLAREQD
FRSLAENAPD AIVRYDRQLR RLYINPVLER LLGQDKATLL GKPFENHAPV DMTAYQDALE
KTFQTGLQQV TEVQYPLPDG TLGWFHARFE PEFAEDATVK SVMGIVRDIT ELVEQRELAQ
HLAFTDMLTG LPNRALFEKR FKEAAAEAKS TDCPFALLML DLDHFKDVND SLGHNCGDEL
LRQVTARLSH CVNECDTIAR MGGDEFAILL AESRGSDEAG QVADLILSTL AQPFFIESQE
LFISGSIGIA FFPHDSANLD ELFTYADTAM YSAKHKGRNN FQCYDQELTR HVSAKLSLGA
SLRYACVNHE LQLYYQPKVQ LKDGRVVGVE ALLRWWHPVL GMLTPDRFIS IAEETGLIVE
IGEWVLKTAC QAAVDFNRNA TAPFKVAVNL SCRQFLQNDL AATIEAILKT TGCRGEWLEC
EITESLMIED NPQVAKTLEA LRSLGITIAI DDFGTGYSAL NYLSRFPIDV LKIDRSFINH
IDTDPCKVGL VKVFIALGTN LEMQIVAEGV ETVSESASLQ KLGCGLAQGY LFGKPQPFKA
LMATLSL
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