| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3028 |
|---|
| Symbol | |
|---|
| ID | 3725735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 3539766 |
|---|
| End bp | 3540242 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637752639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358433 |
|---|
| Protein GI | 77920618 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATG AAACAGCACA ACAACTCAAC GAGCGGTTCT ATCGTCAGAT CCCGATGACC
CGTCATATGG GGCTTCGCAT CACCGCCTGG GACGGACAGG TGTTGCGCAT GGACGCCCCC
CTGGCTCCCA ACATCAACGA CAAAGGCACC GGCTTTGCCG GATCCCTGGC CACGCTGGCC
ACCTTTGCCG CTTGGGCGGC GGCCACCCTG CTGGCCGAAA AAATAACGGC ACAAGCCTGC
GAGGCTGCGG TCTTTGAAAG CGATATCCGC TACCTGCTGC CGGTTAACGG GGATTTTTAT
GTAGAGGTCC CGGTTCCGGA GGAAGAGGCC ATGCAGGCGT TTAAAGGGTC TTTGCAGAAT
CGGGGCCGCG CCAAACTGGC CTTGAACGCC GTCATTTTCC AGGATGGGGA AGAAAAAGTA
CGTTACCGCG GCCGCTACGC CGTGAGGGTG AGACCCTCCC AGGGTTCCAT TGAATGA
|
|---|
| Protein sequence | MIDETAQQLN ERFYRQIPMT RHMGLRITAW DGQVLRMDAP LAPNINDKGT GFAGSLATLA
TFAAWAAATL LAEKITAQAC EAAVFESDIR YLLPVNGDFY VEVPVPEEEA MQAFKGSLQN
RGRAKLALNA VIFQDGEEKV RYRGRYAVRV RPSQGSIE
|
|---|
| |