Gene Pcar_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3017 
Symbol 
ID3725724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp3530299 
End bp3531393 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content58% 
IMG OID637752628 
ProductC4-dicarboxylate transport system, periplasmic component 
Protein accessionYP_358422 
Protein GI77920607 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0000000000138173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CCGTGATGAT GGCTGTGTTA ATCCTGAGCG TCGTTTTCTG CGGACTTACG 
GGATGCCAGA AAGAGCAGGA CCCATCCCAG CAGGAACCGT CGGCACCGGA AAAGGCCGCT 
GCTGCCAAAA AGGATCCGTT GGTTGGTTGG CAGCCGCAGT TTGATCCCTC TTCAGCCCAA 
TATACCTACC TGTTGTCCAA TCTTGATCAT CCGACCATCG AAGGGGTGGC TGTCGGCTAC 
CATATCCGCG ACAAAGTATG GGAGCGCAGC GGCGGGCGGT TGTATGTCGA TTACCGTCCC 
TTGTCTCAAC TCGGTCAGGA GAAGGGCGTT CTGAGCAAAC TGAAGCTCGG AGCAGTGCAA 
GGCGTACTCT GCTCTTCGGT GGCCGCCGCC AACATCTCGG ATACCCTGGG TATCGTCAAT 
CTACCCTTTG TTATCGATAG CGCGGACAAA CTGGAGCAGT TCCGCAACGA TCCCGAACTG 
TTCGATGAAT TCCGCAACAG CGCCCTGCGT CAGGGGCTGA TGGTCGTCGA CATCACCAGC 
TACGGTTCCT ACGGCTGGGC CACCAATACC CCGGTCCGCA CCCTCGCCGA AGCCCGCCAG 
GTTAATTTCC GTATCGCCCA GGCGCCGGTC AACACCGATT TTTATCGCGC CTGGGGCATG 
AAATTCACGG TCATGCCCTG GGGTGACGTG CCTCAGGCCC TGCAGACCGG TGTAATCGAC 
GGTCTCGATC ATACTCCGAC GGTCTGCAAC ATCACCCACA AGTTCGAGGT CGCCCGTTAT 
TTCACACGTG TTGATTACGC TCAGGGACTG TTCATTCATC TCATGAACAA AGCCTGGCTC 
GAGCGCCTGC CCGAAGACCT GCGCCGGATA CTGCTGGAAG TCATCGCCGA GGAGAGTGCC 
GCTGCGCGCC AGCGCGCTCG CGTGCAGCAG CAGGAGCAGA TCGCTGCCGC CGAAGCTGTC 
GGCGTACAGT TTTTTGAACT GGCTGCCGAG GATCGCGCGG AGCTCATTCG GTTGAGCGAA 
CCTGTTTATG CAACCTGGGG AGCGAAAATA GGGGCTGAAT ACCTGGCCAA AGTACGCCAG 
CGCCTGGCCC GATAA
 
Protein sequence
MKKTVMMAVL ILSVVFCGLT GCQKEQDPSQ QEPSAPEKAA AAKKDPLVGW QPQFDPSSAQ 
YTYLLSNLDH PTIEGVAVGY HIRDKVWERS GGRLYVDYRP LSQLGQEKGV LSKLKLGAVQ 
GVLCSSVAAA NISDTLGIVN LPFVIDSADK LEQFRNDPEL FDEFRNSALR QGLMVVDITS 
YGSYGWATNT PVRTLAEARQ VNFRIAQAPV NTDFYRAWGM KFTVMPWGDV PQALQTGVID 
GLDHTPTVCN ITHKFEVARY FTRVDYAQGL FIHLMNKAWL ERLPEDLRRI LLEVIAEESA 
AARQRARVQQ QEQIAAAEAV GVQFFELAAE DRAELIRLSE PVYATWGAKI GAEYLAKVRQ 
RLAR