Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_3003 |
Symbol | |
ID | 3725710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3512810 |
End bp | 3515260 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637752614 |
Product | outer membrane efflux protein |
Protein accession | YP_358408 |
Protein GI | 77920593 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGT ATGGCTCCTA CCCTTTCAAC ACCTCGATCC GTTGCCGATT TTTCGGCTTG CTATGCGGTC TGTTGATTCT GCTGCCCGTC CCTTTTGCCG CCGCCTCGCC GCCGGTACGC ATCGGGGTGG TTATGGATGG CCCCTGGGAG GGTAACGCCG GGATCCTGCG TTTGTTTCAC GAAGAAATTA ATGATCTGCT GGGGCATGAG TTCTCGATTC AGTTCCCCGA ACGGGCAAAC CTGACCGCGG ACTGGACGCC GCTCGCTGTT CATCGCTGTA TCGATCGATT ATTGAGCGAT CCCCAGGTGG ATATCGTGCT TGCCATCGGT ATGCTGGCAG GGCAGGACCT GGCGCGTCGC GGCCCGCTGC CGAAACCGGG GCTGGCTCTC TTGACGACGG ATCGATCGGC CCAACGGTTG CCGGCCAGCA ACGGCAGCAG CGGAGTGCAC AATTTCACCT ACATCGCACC GGCAACCTCT CTGTTGCGCG ACCTGCAGCT TTTCCAGGAA CTGGTTCCGT TTCGCCATCT GACCATCCTC AGCTATCGTC CCTATCACGA AGCAATTCCC GAAATAGCCC AAACGCTGGA AAAAAAACTT GCCGCAGACG GTATCGAGCT GACGGTGATC CCCCTGGAGG GTCGCGTTGC ACCCGCCCTG GCGGCGCTGC CGGTCACTAC GGACGCCGTC TATATCACAC CTTTGCTGCT CTCCGCCCCT GAGTTTCGGA AGCTGGTCGG GACGCTCATC GAGCGCAAAC TGCCAAGCTA CTCCTATCTG GGATATGAAG AGGTCCAGCA AGGGGTGCTG GCAGGCAGCG CACCGGCGAC CGACTTTTCC CGTCTGGCGC GCCGCACGGC CCTTAACCTC CAGCGTATCC TGCTGGGCGA AGATGCCGCC GATCTTCCGG CGACCATCAA CAGGGACGAA CGATTGACCG TCAACATGGC AACGGCCCGG GCTATCGGGT TCTCACCGAC GTGGGATGCG TTGATCGAGG CCGAGCAACT CTATGCCGAA CCGAGGGGCG CAGCGCGACG CTGGTCTCTG GAGTCGGTGG TCAGGGAAGC CGTTGCGGTA AACCTGGATC TGGCCGCGGC CGATCGCAAG GTAGCCGCCG GCCTGGAGGA TATCCGCAAG GCCCGCGCCA ATCTGCTGCC GCAGCTGGGT CTGTCGGCCA CCGGCCTGAT GATTGATGAC GACCGTGCCG CAGCCAGTTT CGGCACTCAG GCCGAACGCA GTTTGAGCGC ATCTTTGGAA TTGCAACAAT CGCTTTACTC GGAACCGGCC TGGGCCAATT TCGAGATTCA GCGGCATCAA CAGGCAGGCC GCCAGGAGGA GTGGCGGCAA CTGCGCCTGG ATGTCATTCA GGAAGCCGCT AGCGGCTACC TCAATGTGTT GCGCGCCAAG ACCCTGCAAA CGGTTCAAAA AAACAACCTG CGGGTGACGC GCTCCAATCT CGACCTGGCG CGCATGCGAC GGGAAGTCGG CTTCTCCAGT CCGGCCGAAG TCTACCGGTG GGAAAATCAA CTGGCCCGCG ACCGTCGTGC CCTGATCGAC GCTGACGTTG CCCGGACTCA AACCGAAATC GCTCTGAACC GCACGCTGCA CCGCCCCCTG GAAGAGGCCT TTGCCACGGC GGATCAGGGG TTGGACGATC CGGTCCTGAT TGCCAGCGAC CCGCGCCTGT TCGCGCAGTT GGCTACCCCC GCGGCGTTTG CCCGCTTCCG TGACTTTATG GTCGAACAGG GCCTCCGCTC ATCGCCGGAA ATAAAGCGTC TGGACGCCGC CATTGCCGCC CAACAACGGG CCAGAACCGC GGCCCGTCGT GCCTTCTGGG TACCCGATCT GTCCTTGCAG GCAGGTGTCA CCCAACTGCT TGGCGAAGAC GGCGAGGGGG TCGACTCACC TTTTAACCGG TTCAAAGGCC TGCTTCCCGT CGATATTCCG GAAGCCGATG ATACCAGCTG GCATGTCGGC CTCAAACTTT CCCTGCCGCT GTTTGCCGGG GGATCCCGCT GGGCCGAATT GGTCCAGGCC GAACGTCAGA TCGACCGGCT TGAATTGGAA CGCAAAGCGC TCTCCGCACG CCTGGAACAG CGCATCCGTT CCGCACTGCA GGACAGTCGC GCATCCCATG CCGGGATCCG CCTGTCCCGT GAAGGGGCGC AAGCCGCGGC CAAAAACCTG GAATTGGTCA CCGATGCCTA TTCCCGCGGA GTCGTTTCCA TCCTCGAATT GCTCGATGCC CAGAACGCTT CGCTGATCGC CGAACAATCC GCGGCTAACG CGGTTTATGA TTTTCTTCTC GATTTGATGG CTGTGCAAAG GTCCCTGGGG CAGTTCGATT TTTTCCTCAG TGCCGGCCAG CGCGAACAGT GGTTTCAACG CCTTGAGCTT TTTCTGCAAT CCTCGCCAGC GGAATATGAC CGGATTCCCG CCACGGAGTA G
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Protein sequence | MAKYGSYPFN TSIRCRFFGL LCGLLILLPV PFAAASPPVR IGVVMDGPWE GNAGILRLFH EEINDLLGHE FSIQFPERAN LTADWTPLAV HRCIDRLLSD PQVDIVLAIG MLAGQDLARR GPLPKPGLAL LTTDRSAQRL PASNGSSGVH NFTYIAPATS LLRDLQLFQE LVPFRHLTIL SYRPYHEAIP EIAQTLEKKL AADGIELTVI PLEGRVAPAL AALPVTTDAV YITPLLLSAP EFRKLVGTLI ERKLPSYSYL GYEEVQQGVL AGSAPATDFS RLARRTALNL QRILLGEDAA DLPATINRDE RLTVNMATAR AIGFSPTWDA LIEAEQLYAE PRGAARRWSL ESVVREAVAV NLDLAAADRK VAAGLEDIRK ARANLLPQLG LSATGLMIDD DRAAASFGTQ AERSLSASLE LQQSLYSEPA WANFEIQRHQ QAGRQEEWRQ LRLDVIQEAA SGYLNVLRAK TLQTVQKNNL RVTRSNLDLA RMRREVGFSS PAEVYRWENQ LARDRRALID ADVARTQTEI ALNRTLHRPL EEAFATADQG LDDPVLIASD PRLFAQLATP AAFARFRDFM VEQGLRSSPE IKRLDAAIAA QQRARTAARR AFWVPDLSLQ AGVTQLLGED GEGVDSPFNR FKGLLPVDIP EADDTSWHVG LKLSLPLFAG GSRWAELVQA ERQIDRLELE RKALSARLEQ RIRSALQDSR ASHAGIRLSR EGAQAAAKNL ELVTDAYSRG VVSILELLDA QNASLIAEQS AANAVYDFLL DLMAVQRSLG QFDFFLSAGQ REQWFQRLEL FLQSSPAEYD RIPATE
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