| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3002 |
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| Symbol | |
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| ID | 3725709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3511702 |
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| End bp | 3512805 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637752613 |
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| Product | membrane-fusion protein, component of multidrug efflux system |
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| Protein accession | YP_358407 |
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| Protein GI | 77920592 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 98 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTAC GATTTTTTGC TGTTTTGTTC CTGATGCTGT TTCTTCCGGC CTGTCGCGAC
GACGGTCCCC CCCAGGCGCC GCCTTTGCGC CCGGTGCGTT CCCAGGTGGT GCAGGCCGAT
AGCGGGCACA CCGAACGCGC TTTTTCCGGT ATCGCCAAGG CCGGTCAGGA ATCCCGGCTG
TCGTTTCGGA TTCCCGGCGC TATCGAACAG GTCTCCGTGC AGGTCGGCGA CAAGGTGAAC
GCCGGACAGC TCATTGCGCG GCTCGATGCC ACCGATTACG CGCTGCAAAG ACAGGAGGCC
GAGGCGGCCC TGGCCAAAGC CAGAGCCCAG GCACGTAATG CCGAGGCCAA CTATGCCCGC
GTGCGTGCCT TATACGAAAA TCGCAACGCC TCGCGCAACG ATCTGGATGC GGCCCGCGCC
GGCAGCGAAT CGGCGAATGC CGCCGTAAAG GCCAGCCGGA CCCGACTGGA ATTAGCTCTG
TCGCAAATAC GCTATACCCG CCTGACCGCA CCGACCGCCG GCGCCATTGC CAGCGTACCG
GTCGAAGCCG GAGAAAATGT GGGGGCCGGC CAGGTGGTGG CGGTACTCAC CGCCGGTGCC
ATGCCGGAAG TCAGCGTCGC CGTCCCCGAA AGTCTCATCG CCGACATCGA ACAGGGCGGC
GAGGTTACGG TGCGGTTCGA TGCGTTGCCG CAACGAAGCT TTGTCGGCCG GGTCACCGAG
GTTGGGGTGG CCGCCACCAC CTACGCAACA ACCTATCCGG TGACGGTACG TCTGGCACGC
GACAACAGCG CCATCCGTCC GGGTATGGCT GCGGAGGTAA CCTTTCGCTT CCGTCAGGCT
GGGGAGCAGG GTCGCCGTTT TGTGGTCCCC GCCGAAGCTG TGGGGGAGGA TCGCGAAGGC
CGGTTCGTAT TTATTCTTGA GCCCGGTCCG GCGGGCCAGG GCCAGGTTCG CAGGCAGCCG
GTACGCCCGG GCGAATTGAC TGCTGACGGG CTGGAGATAC TTGCGGGACT GCACAATGGC
GATCGTATTG TCACGGCAGG CGTAGCTCTC ATCCACGATG GCCAGACGGT CAAACTGCTG
GAGGAAAAGG AGCAGGCTCC ATGA
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| Protein sequence | MPVRFFAVLF LMLFLPACRD DGPPQAPPLR PVRSQVVQAD SGHTERAFSG IAKAGQESRL
SFRIPGAIEQ VSVQVGDKVN AGQLIARLDA TDYALQRQEA EAALAKARAQ ARNAEANYAR
VRALYENRNA SRNDLDAARA GSESANAAVK ASRTRLELAL SQIRYTRLTA PTAGAIASVP
VEAGENVGAG QVVAVLTAGA MPEVSVAVPE SLIADIEQGG EVTVRFDALP QRSFVGRVTE
VGVAATTYAT TYPVTVRLAR DNSAIRPGMA AEVTFRFRQA GEQGRRFVVP AEAVGEDREG
RFVFILEPGP AGQGQVRRQP VRPGELTADG LEILAGLHNG DRIVTAGVAL IHDGQTVKLL
EEKEQAP
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