Gene Pcar_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2987 
Symbol 
ID3725694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand- 
Start bp3495745 
End bp3496734 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content59% 
IMG OID637752598 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_358392 
Protein GI77920577 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.188623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACA GCACGCGCGC CATGATCCTC GGTACCGGCC GCTCTATTCC CGAGAAAATC 
CTGACCAATG CCGACCTGGA AAAGATGGTC GATACCAACG ACGCATGGAT TGTTGAACGC 
TCCGGCATCC GTACCCGACA TATTGTCGAA CCGGGGACGC CCCTTTCGTC TCTGGCCGCC 
GCTGCCGGTA AGCAAGCCAT TGAAGATGCC GGTCTGGCCG TCACCGATAT CGACCTGATC 
ATTCTCGCCA CGGTCACCGG CGATATGAAG TTCCCTGCCA CGGCCTGTTT CGTGCAGACT 
CTGCTCGGCG CGGAGAATGC AGCAGCCTTT GATATCAGCG CCGCATGCTC CGGGTTTCTT 
TACGGCATGC AACTGGCGGA TAGCCTGATC CGTACCGGAA CCCATCGAAA CATCCTGCTC 
ATCGGCGGCG AGGTTCTTAC TTCCATGGTC AACTGGGAAG ATCGCAATAC CTGCGTACTG 
TTCGGCGACG GCGCGGGAGC CGTGGTGCTG GGGCCTTCGC AGCAGGATCG CGGCATTCTC 
ACCACCCAGA TCGGTGCCGA CGGCAATCAC AGCAAGCTGC TCTACAATCC GGGCTGCGGT 
TCCATCAACC CGCCCACTCC CGAAAATGCG CGCGACAAGC TGCATACCCT GCGCATGGAA 
GGGCGCGAAG TCTTTCGGCA TGCGGTGGTG TGCATGAGCC GCTCCATGAA AAAATCGCTT 
AAAGCTGCGG GGGTGGCTAT TGAGGATCTG GACCTGGTCA TTTCCCATCA GGCCAACCTG 
CGCATCATTG AAGCTCTGGC CAAACGCCTG AAACTGACCG AAGGGCAGGG CTATGTAAAT 
GTCGATCGCT ACGGCAATAC CTCCGCCGCT TCCATTCCCA TCGCTTTGGA CGAAGCGCGC 
CGCAACGGAC GTATCGGTGA GGGCGACATG GTCGGGCTTG TCACCTTCGG CGCCGGTTTC 
ACCTGGGGAT CCAGCATCGT TCGGCTGTAA
 
Protein sequence
MDNSTRAMIL GTGRSIPEKI LTNADLEKMV DTNDAWIVER SGIRTRHIVE PGTPLSSLAA 
AAGKQAIEDA GLAVTDIDLI ILATVTGDMK FPATACFVQT LLGAENAAAF DISAACSGFL 
YGMQLADSLI RTGTHRNILL IGGEVLTSMV NWEDRNTCVL FGDGAGAVVL GPSQQDRGIL 
TTQIGADGNH SKLLYNPGCG SINPPTPENA RDKLHTLRME GREVFRHAVV CMSRSMKKSL 
KAAGVAIEDL DLVISHQANL RIIEALAKRL KLTEGQGYVN VDRYGNTSAA SIPIALDEAR 
RNGRIGEGDM VGLVTFGAGF TWGSSIVRL