Gene Pcar_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2979 
SymbolilvA 
ID3725686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3488724 
End bp3489971 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content62% 
IMG OID637752590 
Productthreonine dehydratase 
Protein accessionYP_358384 
Protein GI77920569 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAC TGACGCAGAT AAGGGCCGCG GCGGATGCGC TGCAAGGACA GTTTCGTCGC 
ACGGAACTGA TCCACTCCCA CTTTTTTTCC GAACAGATCG GCTTGCCGCT CTATTTCAAG
TGTGAAAACC TGCAAAGATC CGGGTCGTTC AAGGTGCGTG GCGCCTTTCA TTTCATGGCC
CGCCAACCGG CGCAGCGTCT TGCCGCAGGG GTGGTCACCG CTTCGGCCGG CAACCATGCA
CAAGGGGTGG CTCTTTCCGC GGCCCGACTC GGAGTGGCCG CCACGGTGGT AATGCCGGAA
AACACCCCGT TGGCCAAGAT GCAGGCCACG CGTGGATACG GTGCCGAGGT GGTATTGCAC
GGCACGGTAT TCGACGATGC CCAGGAGGAA GCGCTACGTC TGCAACACAC CCACGACCTG
CTTTATGTAC CGCCTTTTGA CCATCCTCTG ATCATGGCGG GACAAGGGAC CATCGGTCTG
GAGATTATCG AAGACCTGCC CGATGTCGAC ACCCTATTGG CACCCGTCGG CGGCGGCGGT
CTGATTTCGG AGGTGGCGAC CGCCATTAAA GCGCTGCGGC CCACCGTGCG GGTCATCGGG
GTGGAGGCCG CAGCAGCGCC AGCCGCCTTG TTATCACGCC GCCAGGGCCA CATTGTCGGT
CTGTCCGGAG CCCACTCCCT GGCCGACGGT ATTGCGCTCA AGCGCATCGG CGAGCAGACC
TTTCCGGTTA TCGAGGCATT GGTCGATGAA CTTGTGACGG TCAACGAAGA ACAGATCGCC
CAGGCCATTG TGGCGCTGAT GGAAAAAACC CGACTGGTGG TGGAGGGTGC CGGTGCCGTG
GGACTGGCCG CCTTGCTGCA CGCGGCCCGG CCGCTGGCGC GCGGCCGCAC GGTCTGTCTG
TTGTCCGGGG GCAACATCGA TGTACAGACC ATCGCCCAGG TGGTCGATCG CGGCCTGGTG
GCGGCCGGTC GCTATCTCAA GATCCGGATT GAACTCAACG ATGCCCCAGG TGCATTGGGA
CGGCTGGCAT TGTTGTTGGG CGAATGCCGT GCGAATATCT ACCATGTCAG TCACGACCGC
CATCGCCTCG GCATTCCCCT GGGCCGGGCC GAGGTCAACT TGGAGCTGGA AACGCGCGGT
TCGGAACATG TGCGGGAAAT TCTGGCTGCC CTCGCAGGGG CGGATTACAA GGTGGTAGCT
CTGGATGCCG AAATCGTGCC CGGCCAGGAA CCCGGTACGG GCTGCTAG
 
Protein sequence
MLSLTQIRAA ADALQGQFRR TELIHSHFFS EQIGLPLYFK CENLQRSGSF KVRGAFHFMA 
RQPAQRLAAG VVTASAGNHA QGVALSAARL GVAATVVMPE NTPLAKMQAT RGYGAEVVLH
GTVFDDAQEE ALRLQHTHDL LYVPPFDHPL IMAGQGTIGL EIIEDLPDVD TLLAPVGGGG
LISEVATAIK ALRPTVRVIG VEAAAAPAAL LSRRQGHIVG LSGAHSLADG IALKRIGEQT
FPVIEALVDE LVTVNEEQIA QAIVALMEKT RLVVEGAGAV GLAALLHAAR PLARGRTVCL
LSGGNIDVQT IAQVVDRGLV AAGRYLKIRI ELNDAPGALG RLALLLGECR ANIYHVSHDR
HRLGIPLGRA EVNLELETRG SEHVREILAA LAGADYKVVA LDAEIVPGQE PGTGC