Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2962 |
Symbol | |
ID | 3725669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3472640 |
End bp | 3473062 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637752573 |
Product | secreted and surface protein |
Protein accession | YP_358367 |
Protein GI | 116878652 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.00154745 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCA TCCTGACCAC CCTCAGAGAA GATCCGGCTT TCGAAACGCT GCTGCATGCC CTGAACAAAG TCAGCCTGCT GGAGGTTTTG GCCAACGCTG AAAAAATCAC CCTGTTCGCA CCCGACAACC AGGCCTTCAC GCGCATCAAC CTTGAGGAAA TACAGCTCGA CCGATCGAAA CTGACCGATA TCCTCACCTA CCACCTGGTC GATGGCGAGC ATCCCTTCGA GGGCCTTGAA GCCGAGGAGA ACATCTATAC CCGCAACGGC AAACACCTGA CCGCCCATTT GGAGGCCGGG GAATTGCGTA TCGACAATGC GGCCCTGACC CGAACCGACA TCCGCTGCAG CAACGGCATT ATCCATGTCA TCGACAACGT CTTTCTGCCG CAATTCTCCG GATGGTACTG CGCCTGCTGT TAA
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Protein sequence | MKSILTTLRE DPAFETLLHA LNKVSLLEVL ANAEKITLFA PDNQAFTRIN LEEIQLDRSK LTDILTYHLV DGEHPFEGLE AEENIYTRNG KHLTAHLEAG ELRIDNAALT RTDIRCSNGI IHVIDNVFLP QFSGWYCACC
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