Gene Pcar_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2962 
Symbol 
ID3725669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3472640 
End bp3473062 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content55% 
IMG OID637752573 
Productsecreted and surface protein 
Protein accessionYP_358367 
Protein GI116878652 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.00154745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA TCCTGACCAC CCTCAGAGAA GATCCGGCTT TCGAAACGCT GCTGCATGCC 
CTGAACAAAG TCAGCCTGCT GGAGGTTTTG GCCAACGCTG AAAAAATCAC CCTGTTCGCA
CCCGACAACC AGGCCTTCAC GCGCATCAAC CTTGAGGAAA TACAGCTCGA CCGATCGAAA
CTGACCGATA TCCTCACCTA CCACCTGGTC GATGGCGAGC ATCCCTTCGA GGGCCTTGAA
GCCGAGGAGA ACATCTATAC CCGCAACGGC AAACACCTGA CCGCCCATTT GGAGGCCGGG
GAATTGCGTA TCGACAATGC GGCCCTGACC CGAACCGACA TCCGCTGCAG CAACGGCATT
ATCCATGTCA TCGACAACGT CTTTCTGCCG CAATTCTCCG GATGGTACTG CGCCTGCTGT
TAA
 
Protein sequence
MKSILTTLRE DPAFETLLHA LNKVSLLEVL ANAEKITLFA PDNQAFTRIN LEEIQLDRSK 
LTDILTYHLV DGEHPFEGLE AEENIYTRNG KHLTAHLEAG ELRIDNAALT RTDIRCSNGI
IHVIDNVFLP QFSGWYCACC