Gene Pcar_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2960 
Symbol 
ID3725667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3468818 
End bp3469738 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID637752571 
ProductFe-S oxidoreductase 
Protein accessionYP_358365 
Protein GI77920550 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.392137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA AACCGTATCT TGTTTTTTCC CAACACCTGA AACAACGCTT CGGCGGACGC 
GTCCACAAAA TATCCATCGA TGCGGGATTT TCCTGTCCCA ACCGTGGTGC CACCCGTGAC
CAGCCCGGCT GCCTGTTCTG CGATCCGGAC GGCTCCGGCT CGTTTGGCAT TCACCGCGGA
CTTGCTGTCG CCGAGCAGCT TGAGCGGGGC AAGGAGATCA TGGTCCGCAA ATACAAGGCC
AAGCACTTTC TGGCCTACTT CCAGCCCTTC TCCAACACGT TCGCTCCCCC TGAACGCCTG
CGCAGCCTGT ACGATGAAGC CTTGGGCGTA TCCGGCGTGG TGGGCCTGAC CGTCGGCACC
CGTCCGGATT GTTGCCCGCC GGCCGTTCTG GATTTGCTGG AGGAATATCA CCGCCGCACC
TATTTCTGGC TGGAACTGGG TCTGCAGAGC AGCCACGACC GCAGTCTGGA TTTTCTCCGT
CGCGGCCACG ATTACGCCTG TTTCCTGGAG GCCTATACCG CTGCCAAAGC CAGGGGGCTG
AGGGTCTGTG TGCACGTTAT TCTGGGATTG CCGGGAGAAA CCCGCGAGGA CATGCTGGCC
ACGGCTGAGG AGATGGCCCG GCTGCAGGTT GACGGCATCA AGCTGCACCT GCTGCATGTT
CTGCGCGGCA CCCGCCTGGG GGAATTGTAC CAGCAAGGTG ACATCAACAT ACTGGAGCAG
GACGAATACG TGTCGCTGGT GGCCGATGTC ATCGAACGCC TGCCGGCATC GGCCCTGATC
CACCGTCTGA CGGGGGATGG ACCGCGGGAT AAGTTACTGG CACCGTTGTG GTCTCTGAAA
AAATGGGAAG TGCTCAACGC CATCGACAAT GAATTGTATC GACGCGGCAC CTGTCAGGGA
TTTCGGGCGG GGGCGAAATA A
 
Protein sequence
MQKKPYLVFS QHLKQRFGGR VHKISIDAGF SCPNRGATRD QPGCLFCDPD GSGSFGIHRG 
LAVAEQLERG KEIMVRKYKA KHFLAYFQPF SNTFAPPERL RSLYDEALGV SGVVGLTVGT
RPDCCPPAVL DLLEEYHRRT YFWLELGLQS SHDRSLDFLR RGHDYACFLE AYTAAKARGL
RVCVHVILGL PGETREDMLA TAEEMARLQV DGIKLHLLHV LRGTRLGELY QQGDINILEQ
DEYVSLVADV IERLPASALI HRLTGDGPRD KLLAPLWSLK KWEVLNAIDN ELYRRGTCQG
FRAGAK