Gene Pcar_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2948 
SymboldegQ 
ID3725655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3453171 
End bp3454607 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content60% 
IMG OID637752559 
Productserine endoprotease 
Protein accessionYP_358353 
Protein GI77920538 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGTT TTCGACGTAC CCTTGTGACA CTGCTCATAA GTGGACTGGT GGTGGCAACT 
CTGCCCGCCT GCAAAACGGA TTCGAACAAG CCGACTGCGC CGGACACACC ACCGGCAGCG
CAGGCGCCAC CGGTACCCGA ACCGGCCCCG GAACTGCTTG CCACGCAGGC GGCCTTTATC
GATGTATCTG AAAAAGTCAC GCCCTCGGTG GTCAATATTC AGGCCGCGCG GGTGAGCCGC
ACCCCCAGGC TGGGTCCGCT ATTCGAGGAT TTTTTCAACG AAATGTTCAG AGGCAGGCGC
CTGCCTCAGC AAAAATCCCG CAGTCTCGGT TCCGGCGTCA TTATCAGTTC CGACGGATAT
ATCCTGACCA ACGAACATGT CATCAAAGGT GCCGAGGAAA TCAAGGTCAA GTTATCGGAT
GACCGCGTCT ACGAAGGCCG ACTCGTCGGG TCCGACCCGC GCACCGATGT CGCGGTACTC
AAAATCGAGT CCACGGAAAA ACTACCGGCG GCGGTACTCG GCGATTCCGA CAAATTGCAG
GTCGGCCAGT GGGCTCTGGC CATCGGGAAT CCCTTCGGCC TCGACCGAAC CCTGACCGTG
GGGGTGGTGT CGGCCACCGG ACGCACCAAT GTCGGCATCG AAGATTATGA AGACTTCATC
CAAACCGATG CCTCCATCAA CCCCGGCAAT TCGGGCGGCC CGCTGCTCAA CATCTACGGC
GAGGTGGTCG GCATCAACAC CGCCATCGTC GCCAGCGGCC AGGGCATCGG CTTCGCCATC
CCCATCAACA TGGCGCGTGC CATCAGCGAC CAGTTGATGA CCACCGGGCA GGTGGTGCGC
GGCTGGCTGG GAGTCAGCAT TCAGGATCTG TCGGCGGAGC TGGCCGACTC TTTCGGCCTT
GACCGTGCAA CCGGCGCCCT GGTCAACCAG GTTCTGCCGG ATTCGCCTGC CCAGCAGGCC
GGCATTCGGC GCGGCGACAT CCTGCTGGAA CTTCAAGGGC GCACCATTCG CAATGCCAGC
GACCTGCAAC AATTGATTGC CAACACCCCG GCCGGCAAAA CCGTGGACCT GAAAATATTG
CGCGAAGGCC GGGAATCGAC CATTCAGGTC ACCATCAAGC CACGCGGCCA AGTCGCCGGC
GCCTCCTCGG GAGAACGTCA GAGCCTCGGG CTGACACTGG TCAACACGGA GCAAAACCGC
GGCATCGCGG TCAGGGACGT TGCTTCCGGA AGCATCGGAG CCGAAGCCGG CATCCGTCCC
GGTGATATTA TCCTGAGCCT GAATAACGTC AAATTAACCG ACCTGCTTTC TTTCGACCGG
GCGCTCAAGG AAGCCCAAAC AACAAAAATC GTACGGCTGC TGATCAAGCG CGGAGAAGCT
ATGTTGTACC TGGCTTTTCC CGCATCGGCA TTTAACGCCG ATTCCGATTT ACCATAA
 
Protein sequence
MMRFRRTLVT LLISGLVVAT LPACKTDSNK PTAPDTPPAA QAPPVPEPAP ELLATQAAFI 
DVSEKVTPSV VNIQAARVSR TPRLGPLFED FFNEMFRGRR LPQQKSRSLG SGVIISSDGY
ILTNEHVIKG AEEIKVKLSD DRVYEGRLVG SDPRTDVAVL KIESTEKLPA AVLGDSDKLQ
VGQWALAIGN PFGLDRTLTV GVVSATGRTN VGIEDYEDFI QTDASINPGN SGGPLLNIYG
EVVGINTAIV ASGQGIGFAI PINMARAISD QLMTTGQVVR GWLGVSIQDL SAELADSFGL
DRATGALVNQ VLPDSPAQQA GIRRGDILLE LQGRTIRNAS DLQQLIANTP AGKTVDLKIL
REGRESTIQV TIKPRGQVAG ASSGERQSLG LTLVNTEQNR GIAVRDVASG SIGAEAGIRP
GDIILSLNNV KLTDLLSFDR ALKEAQTTKI VRLLIKRGEA MLYLAFPASA FNADSDLP