| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2945 |
|---|
| Symbol | |
|---|
| ID | 3725652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3450417 |
|---|
| End bp | 3451073 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637752556 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_358350 |
|---|
| Protein GI | 77920535 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA TAGGATTGAT TCTAGCGGGT TGCGGTGTGT ACGACGGCAG CGAAATCCAT
GAGGCGGTGC TGGCTCTGCT GGCTATCGAA CGTGCCGGTG CCGAAGTTGT CTGCATGGCT
CCCGATATGA AACAGATGCA TGTTATCAAT CACTTCACGG GTAAAACCGA AAGTGATCAG
GAGCGCGGTG TGCTGGCCGA ATCGGCACGC ATCGCTCGCG GCAAAGTGGT CGATCTGGCG
ACCGTCAGTC CTCAGGATAT CGATGCCCTG GTGATTCCTG GTGGTTATGG CGCGGCGAAG
AATCTTTGTG ATTTTGCCGA GAAAGGCGCC GCCTGCACGG TTCTGCCGGA GGTCGAACAG
TTGGTTCGCA CCATGATCGA CAAGGGCAAG CCGGTGGCGG CTATCTGTAT CGCCCCGGCG
TTGCTGGCCA AAGCCTTGCA GGGTTATACG CCGCGCCTGA CCATCGGCAA CGATCCGGAA
ACCGCTGCAG CCCTTAAGGC CATGGGTGCG GAGCACGTCG ATTGCCCGGC CACCGATATC
GTGGTGGACG AAAAGAACCG GCTTGTGACC ACCCCGGCCT ATATGCTGGC CGGAAATATT
GCCGAGGCCG CGACAGGTAT CGAAAAAGCG ATAAAGCAGT TGCTGACCAT GGTCTGA
|
|---|
| Protein sequence | MKRIGLILAG CGVYDGSEIH EAVLALLAIE RAGAEVVCMA PDMKQMHVIN HFTGKTESDQ
ERGVLAESAR IARGKVVDLA TVSPQDIDAL VIPGGYGAAK NLCDFAEKGA ACTVLPEVEQ
LVRTMIDKGK PVAAICIAPA LLAKALQGYT PRLTIGNDPE TAAALKAMGA EHVDCPATDI
VVDEKNRLVT TPAYMLAGNI AEAATGIEKA IKQLLTMV
|
|---|
| |