| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2937 |
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| Symbol | |
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| ID | 3725643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3433580 |
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| End bp | 3437005 |
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| Gene Length | 3426 bp |
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| Protein Length | 1141 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637752547 |
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| Product | signal transduction protein |
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| Protein accession | YP_358342 |
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| Protein GI | 77920527 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000239358 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGGCA TTCTTTATAT CGCCGCACTG ATAGGGAATC TCTTTCCGCT GCCCGGATGC
CCGCATGGAC AGTTGCTGCT TGCCGGCATC CCCGTGCTGA TGATCGTGCG CCTGTACGGC
ACGGGCTGGG GAACCCTGGC AGCGCTGCTG ACGCCTCTGT TTGCCCTGTC TTTTGGCAAT
ATGGCACCCC AGGAATGGCT GTGGGTTATA GAAGCGGTTT TCATCGGCGC CTTCCTGCGC
CACGGGGTGA AAAATCTATT CACCGCATCC CTCTTGTTCT GGGGATTGCT GGCATGGCCC
ATTCAATATC TGCAGTATGG TCTTCAGTTA CAATACCCGA CCTTTGCAAT GATCCAGGCC
ATCGGCTGGA CAACCTTCAA TGGCCTCGGC AACGCAGCGA TTGCTTCTAT GCTACTACAT
TTTCTGCGGC GTAAAAACAT CCATTCCCAT TCGACCTTCT GTTACCTCGA AACGGAAATC
AATGCCGTCG CCGCTGCGTT TCTGTTGCCA GGGGTAGTGA TTCTGGCCAT GAATATTCAA
GGCCCCCAGG ATTTTATGCG CCCCGGGCTC GAACACGAGG TGACCACCCG GTGCCGGGCT
ATGCAAAAAC GCCTGAATGT CTTTCATGCA AATCTGGCCT CCAAGTTAGC TGGGCTAACC
AGGGCCAGCG CCCAAAACGA GAGTCTGGAA ACCAGACTCA ACCGATTGCT TCAGCAGGAG
AAGTCTGTGC AGCGGGTTCT TATCTGGGAC ACCAAAGGAA AGCTGTTGCT CAGCAGTACC
GCCGCGGCAT ACCGCCCGAG ATCTCCTGAC CCGCTGCGGT CTTTGGCCGT CGACAAGATA
CAAACACTGG CCCTTGAAAA AAAACCGACG GTATTTGCAC TATCCGGCCC GTCAGCAGGG
GCTGTCCCGA TGCTGTGCCT GGGACAGCCC CTCGCAAAAG ACAACCGGGC GATCGGCTTC
GTACTGGCCA GCATCGATCC GCAAAGCTAC ATAGGAATCC TGACAACTGA CCGCAAAGAG
CGACCGGCCG CCCTGCTCGT CGACGGATCG AACCGGGTTG CGGTCAGCAC CAGCCCGGCA
TGGCATGTTT CCGATCCGCT CACCGCGACA CTGTTCGATC CGGCATCAGC GTTTGACCTG
TTGCTTGCCT GGGATCCCGA AGCCAGTCGT GTTTCCAGAC TATGGCCGCA ACGAGTCGGC
GAGCCGACGG AACGTCGGCA AACACCTCTG CGCATGGTGA TCACCCTGCC CGGGGCGCTG
CTCCGGCACC ATCTGCATCG CATGCTGCTG GGCAGCATGT CTCTCATGCT GCTCCCCTGC
CTGATCGCCG TGGCCATGGC CTGGCGGGTA CACAAAAGGA TTATAAAACC GATAAAAAAA
CTATCGGAAA CCACCCGCGA CCTACCCGAA AGACTGCGTA ATGGCGTCGC CCCGGCATGG
CCTTCCGCCC CCATCACAGA AGTTAGCGAC CTGTCCCGAT ATTGCCAGCA GGCGGCCCAG
GCGCTTGCCA CCAGCTATAC CGAACTGGAA AAACAGCGCC GGCACAACAC CGACACCCTG
GACAACCTGC TGGCCAAGCA TCGCTGGGAA TCGTTTACCT CCAGCCGGCA GCTGGAAAAG
ACCGCTCGAC AGCTGGCAAA AGAAAAACAC CAACGACTTC GGGTTCAGGA ATTAATCGAC
AATATCGATG CGGCCGAAAG CCGCTACCAG TTGCTCATCG AAAACAGCCT GGTCGGTATC
TTCGTCTACC AGCATCACCG TTACACTTAT GTCAATCCGC GCTTTGCCGA GATCTTCGGC
TATACGCCCG AAGAGATTGT CGACAGTGCC CCCCAGCCGC AACTGGTGCA CCCGGACGAC
CAATTGTTCG TCGACGCCAA CAATCTCAAA ATCCTCGGAG GAGTCAACGC CAACCATTTG
CGTTACGAGT TCGTCGGGCT GCGCAAAACG GGACAGCCTA TCGACGTCGA AATCCTCATC
GGTCGCGGCA TAAGCGAAGG CCAGCCGGCC CTGATCGGCA GCCTGCTTGA TATCACCGAA
CGCAAGGAAG CGGAAAAAAC CATCGAGCAT CTGGCCTTTC ACGACCCCTT GACCGGACTG
GCCAATCGGC TGCTGTTCAT GGATCGCATC GAGCAGGCCA TCGCCCACGC TCACCGCCAT
CATGAATCCT TCGCCTTGAT GTTCCTCGAT CTCGATCGGT TCAAGACCAT CAATGACTCG
CTGGGCCACT CCGCCGGAGA TGCGGCCCTC AAGGAAGTCG CCCAGCGACT GACCACCTGC
CTGCGTGAAA CCGACACGGT CAGTCGTTTT GGCGGTGACG AATTCAACGT CCTGCTGTCG
GGACCGAGCC ATGAGGAAGA AATCGAACTG ATCGCCCACA AAATCCTCAA AAGCCTGGCG
TGGCCCTACG ATATCAACGA CCATGAAGTC TTTATGACGT GCAGTATCGG CATTGCCAGT
TACCCCAAAG ATGGCCGCGA AGCCATCACC CTGGTCAAAA ATGCCGACAC CGCTTTGTAC
CGGGCCAAGG ATCTGGGCAG AAACAACTTC CAGTTTTACA GTTCCTCCAT GAACGCCCGG
GCCCTGGAGA GAATGGCCAT GGAGAGCAGC TTGCGCCGCA TGTTCGAACG CCAGGAACTA
AGGGTCCATT ATCAACCGCA GGTCGGCCTG CAGAGCGGCC GTATCACCGG CCTTGAGGGG
CTGGTGCGAT GGGAACATCC GGTGGGCAAC ATGATCGCCC CATCGGTCTT CGTGCCCCTG
GCCGAGGAAA CCGGCCTCAT TGTGCCCATG GGGGAATGGG TGCTGCAGGC CGGGTGTTAT
CAGCTCAAGA CCTGGCTCGA CGCCGGATTT GCTCCCATGC GACTGGGGAT CAACGTTTCG
GCCCACCAAC TGCAGAAGAG CGACTTTGCC GAATTGGTGA TGCAGGTCCT CAAAGAATGC
GACCTGCCCC CGCACTATCT CAATCTGGAA ATCACCGAAA CCGTCATTAT GCACAACATG
AACGAAGCGT TTGAAACCCT GCGCCGACTC CGCGCTGTCG GCATAACCAT CTCCATTGAC
GACTTCGGCA CAGGATTTTC CTCCCTGAGC TATCTAAAAG ACCTGCCAGC CGACCATCTC
AAAATCGACC GGGCCTTCGT CCAAAACCTG CCTTTCGGCA ATAACGAGGC CAACATAGCC
CGACATATTA TCGAGATGGC CCATGGCCTC AACCTCAAGG TCATTGCCGA AGGGGTTGAA
AACCAGGCTC AGCTCGACTT TCTGCGTGAA GCCGGATGCG ACGAAATCCA GGGATTTCTG
GTCAGCCGAC CGTTGGCGGC CGAAGATATT ACAGAGATTC TTACAAACGA CGAAATGCTG
CTGAACTTCG AGGAAGACAA AACATGCGGG AAAGATAAGA CCGGTTGGGA GAACTGCGCG
GGATAG
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| Protein sequence | MLGILYIAAL IGNLFPLPGC PHGQLLLAGI PVLMIVRLYG TGWGTLAALL TPLFALSFGN
MAPQEWLWVI EAVFIGAFLR HGVKNLFTAS LLFWGLLAWP IQYLQYGLQL QYPTFAMIQA
IGWTTFNGLG NAAIASMLLH FLRRKNIHSH STFCYLETEI NAVAAAFLLP GVVILAMNIQ
GPQDFMRPGL EHEVTTRCRA MQKRLNVFHA NLASKLAGLT RASAQNESLE TRLNRLLQQE
KSVQRVLIWD TKGKLLLSST AAAYRPRSPD PLRSLAVDKI QTLALEKKPT VFALSGPSAG
AVPMLCLGQP LAKDNRAIGF VLASIDPQSY IGILTTDRKE RPAALLVDGS NRVAVSTSPA
WHVSDPLTAT LFDPASAFDL LLAWDPEASR VSRLWPQRVG EPTERRQTPL RMVITLPGAL
LRHHLHRMLL GSMSLMLLPC LIAVAMAWRV HKRIIKPIKK LSETTRDLPE RLRNGVAPAW
PSAPITEVSD LSRYCQQAAQ ALATSYTELE KQRRHNTDTL DNLLAKHRWE SFTSSRQLEK
TARQLAKEKH QRLRVQELID NIDAAESRYQ LLIENSLVGI FVYQHHRYTY VNPRFAEIFG
YTPEEIVDSA PQPQLVHPDD QLFVDANNLK ILGGVNANHL RYEFVGLRKT GQPIDVEILI
GRGISEGQPA LIGSLLDITE RKEAEKTIEH LAFHDPLTGL ANRLLFMDRI EQAIAHAHRH
HESFALMFLD LDRFKTINDS LGHSAGDAAL KEVAQRLTTC LRETDTVSRF GGDEFNVLLS
GPSHEEEIEL IAHKILKSLA WPYDINDHEV FMTCSIGIAS YPKDGREAIT LVKNADTALY
RAKDLGRNNF QFYSSSMNAR ALERMAMESS LRRMFERQEL RVHYQPQVGL QSGRITGLEG
LVRWEHPVGN MIAPSVFVPL AEETGLIVPM GEWVLQAGCY QLKTWLDAGF APMRLGINVS
AHQLQKSDFA ELVMQVLKEC DLPPHYLNLE ITETVIMHNM NEAFETLRRL RAVGITISID
DFGTGFSSLS YLKDLPADHL KIDRAFVQNL PFGNNEANIA RHIIEMAHGL NLKVIAEGVE
NQAQLDFLRE AGCDEIQGFL VSRPLAAEDI TEILTNDEML LNFEEDKTCG KDKTGWENCA
G
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