| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2930 |
|---|
| Symbol | |
|---|
| ID | 3725636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3424371 |
|---|
| End bp | 3425963 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637752540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358335 |
|---|
| Protein GI | 77920520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 87 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGC TCCCCGTTGC GCAGTACATA GAAGCAGAGA TTAAGGAGTA CAGCGGACAC
CCACTGATAA ATGCGTTGCC TCCGATCAAC TCCCCACAGG ATACCGCCAG GATGCTGAAC
CGTTACCCAG TGGTCGCAGA GGCGGAAAAA AATCTTCCGG GACATATCCG TCGCCATGCA
ATGATGCGCA TATTGGATCA ATTTCTCTAT CCGACCAAAT CTCATCTGCA GCTGGAGCAG
ATGATTTCAG GCATGCTCAG GCGGGGTTAT CTCAGTCGTA ATATTGCTGA TCGGTGCTAT
CAGCGGAATC TGGATGTAGC AAGTGGAACT GACTTTCAGG TTGTAGCCCG CAATGCCGGC
AATGAAGCAT TGGTAAGTTC AGTTATTGGC TGCTCGGGTA CCGGCAAGTC TACAGCGGTA
GAAGCTATTT TGAAGGGATA CTGGCAAGCG ATTTACCATC CTGAGTATCA GCATACCCAA
CTAGTTTGGC TGAAAGTTGA ATGCCCGCAT GATGGCTCAG TGAGAAACTT GTGCACCAAC
TTCTTTCGTG CTGTCGATGA TGCGTTGGGT ACCGATTACC AACAGCTCTA TGTCAAAGCC
AGATCCTCGG CAGAATCCAT GCTGGGTGAC ATCGCAAGGG TGGCTGCTCT TCATTCGGTT
GGCTTACTCG TAATCGATGA AATACAGCAT TTGGAAAAGT CACGCTCCGG TGGCTCAGGC
AAGATGCTTA ACTTCTTCGT GACACTTGCT AATGTTATCA AGGTGCCGGT GCTTTTTATC
GGTACTCCTA AGGCGCTGGA GCTATTTTTG CCCACGATGC GCTCCGCCCG GCGTGCAGTT
CAGTTTGGCA GCTTGAACTG GAGCCGTTTT GTGCGGGCCG AAAGTGGTGA TGGACCAGAC
GGTGAGTGGG AGCGGTTCAT CAAGCGCATG TGGAAGCTGC AATGGTTCAA ATCCCCGACG
CCGCTGACAT GCCCAATGAG TGATCTGTTC TGGGAATATA CCCAGGGGAT TGCCCATATA
GCGGTGGCAC TTTTCTATCT TTGTCAGGCG CGCGCAGTCA TGGCCGGCAG AGAAGTGATT
GACCGTTCTC TGGTGACCAA AGTGTATAAT GAGGAGCTTT CGATCATTCA CCCGATGATC
AATGCCCTGC GAAGCGGTCG CAAGGAGAAA ATCCTTCAGT ATGCGGACCT CGATTTGCCC
ACCGAATCCA TCAGGATGCT GGGATCGCAT GCCCCCGATA TTCCGATGCC AGAGGCCACT
GAAAAGAAAG TGCCCGAGAC TAAACTCGCC AGGTTGATTG ATCTGCTTGA GCAGATGGGA
CTTGGGCAGG ATATCGCGCC AGTTGTTGCA GAACAGGCGA TTGAAGAGAA GCCGGATGAA
GACCTGTTTG GGCTGGTGTC TCATGTAAGA AATTTGCAAG AAAAAACGGA GCCACGGACC
GAACCCGCAA AGCCTGTCCG ACAGAAAGCT GCGCCCTTGA AGCCCGTTTA TCTGGATAAT
GACCTCCGTT TGATGCGAGA TGATGATCCT CAGGTGAGTT ATCAGAATTT CAAACGCAGT
GGAGTCATAA TTGATCTGAC GGCATACTTG TAA
|
|---|
| Protein sequence | MIKLPVAQYI EAEIKEYSGH PLINALPPIN SPQDTARMLN RYPVVAEAEK NLPGHIRRHA
MMRILDQFLY PTKSHLQLEQ MISGMLRRGY LSRNIADRCY QRNLDVASGT DFQVVARNAG
NEALVSSVIG CSGTGKSTAV EAILKGYWQA IYHPEYQHTQ LVWLKVECPH DGSVRNLCTN
FFRAVDDALG TDYQQLYVKA RSSAESMLGD IARVAALHSV GLLVIDEIQH LEKSRSGGSG
KMLNFFVTLA NVIKVPVLFI GTPKALELFL PTMRSARRAV QFGSLNWSRF VRAESGDGPD
GEWERFIKRM WKLQWFKSPT PLTCPMSDLF WEYTQGIAHI AVALFYLCQA RAVMAGREVI
DRSLVTKVYN EELSIIHPMI NALRSGRKEK ILQYADLDLP TESIRMLGSH APDIPMPEAT
EKKVPETKLA RLIDLLEQMG LGQDIAPVVA EQAIEEKPDE DLFGLVSHVR NLQEKTEPRT
EPAKPVRQKA APLKPVYLDN DLRLMRDDDP QVSYQNFKRS GVIIDLTAYL
|
|---|
| |