Gene Pcar_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2925 
Symbol 
ID3725631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3417672 
End bp3419798 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content56% 
IMG OID637752535 
Producttype I restriction-modification system methyltransferase subunit 
Protein accessionYP_358330 
Protein GI77920515 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCC AATCCCAACT TGAATCCTAC CTCTGGGGCG CGGCCACCTT GCTGCGTGGT 
TACATCGATG CCGGGGACTA CAAGCAGTTC ATCTTCCCGC TGCTGTTCTA CAAGCGCCTG
TGCGACGTGT ACGACGAAGA ACTGGCCGAT GCGCTGGAGG AGTCCGGCGG CGATCAGGAA
TACGCCGCAC TCCCTGAGCA GCATCGCTTC CAGATCCCGG AAGACGCCCA CTGGAAGGCC
ACCCGCACCA AGGTCAAGAA CGTGGGCAAG GTCATTCAGG ATGCCCTGCG GGCGATTGAG
ACGGCCAACC CCGATACCCT GTACGGGGTC TTCGGTGATG CCCAGTGGAC CAATAAGGAC
CGCCTGCCGG ACCGCATGCT GCGCGAGCTG ATCGAGCATT TCAGCTCGCA GACGCTTTCG
CTCTCCAACT GCCCCGAGGA TGAGCTGGGC GTGGGCTATG AGTTTCTGAT CAAGAAGTTC
GCTGACGATT CCGGCCACAC CGCTGCGGAG TTCTATACCA ACCGCACCGT GGTTCACCTG
ATGACCGAGA TGCTTGAACC CAGGCCGGGC GAGTCTATCT ATGACCCCAC CTGCGGTTCG
GCGGGCATGC TGCTCTCCGC CGTCGCCCAC CTCAAACGGC AGAACAAGGA ATGGCGGAAC
CTGCGGCTAT TCGGTCAGGA GCGTAATCTG CTCACCTCGG CCATCGGCCG GATGAACCTG
TTCCTGCATG GCATCGAGGA CTTTCGCATC GTCCGGGGCG ATACCCTGGC CAATCCCGCC
TTTGTCGAAG GCGACCGGCT TAAGCAGTTC GACGTGGTGT TGGCCAATCC GCCGTATTCC
ATCAAGCAGT GGGACCGTGA TGCCTGGTCC GCCGATTCGT GGGGCCGGAA CCTCTACGGC
ACTCCGCCCC AGGGCCGCGC CGACTATGCC TTCTGGCAGC ACATCATCAA GAGCATGAAG
GCCAAGAGTG GTCGCTGCGC CATCCTGTTT CCGCATGGTG TTCTCTTCCG CAACGAAGAG
CTGGCCATGC GTGAGAAACT GGTCGCCCAC GATGTTGTGG AGTGCGTGCT GGGCCTCGGT
CCCAACCTCT TTTACAACTC GCCCATGGAA GCCTGCGTCG TTATCTGCCG GATGAACAAG
CCCAAGGAGC GCAGGAATAA GGTGCTCTTC ATCAACGCGG TGAACGAGGT GACCCGCGAG
CGGGCGCAGA GCTTTCTGAC CGACGACCAC ATCCAGCACA TTGTCGCCGC CTACCAGACC
TTTGGCGACG AGGACGGCTT TGCCCGGGTG GTCGGCGATG ATGAGATCCG GGAGAAAGGC
AGCAATCTCA GCATCCCGCT TTACGTTCGA GCGGACAACA GCAATGCTCA GGAGAGGAGC
GAAACCTTTG GCTTGCAACA GGCTATTGCC GATTGGCAGA AGAGTTCAAA AGCATTGCGG
AAATCTATGG ACTACCTATT TGGAATTCTG GAAGGAGTTT CGTCAAAAAC CGATGCACCA
ATCAGGACAA TAACCAAAAA AACAATTCAT AAGGAAAGGG TCGTTCAACC CGCTTTTAAA
CGAGCGGTTT TGGCAGCGGA GGTTACCTCC AAGCTGCACA TGGAGCCCAC CTTTGGCTCC
GTGAAGCACG AAAAAATCGT TTTCCTCTGT GAAAAAATGC TCGGTTTGAG TGAAGCCCTA
GAGCATCACC ACCTGCGCCA GGCTGCCGGC CCTTATGATC CCAAGGCCAG ACGGTCAACA
GACAGAACCT TTACGAAAAA CAAGTGGTTT ATTATAAAGA AAAATGGAAA ACGGATCGAA
TACCTGAAAG GGGAAAAGTT CGGTAGTCAT GAAGGATATT TCGAACGGTA TTTTCCCAGG
GAAAGTAAAT ATATCCACGA CATAGTGGAG TTACTGAGAG CCGCCACCAC GGAACAGTGT
GAAATTGTGG CAACCCTCTT CAGCGCCTGG CATGATTTTC TGGATCAGGG AACAGCGCCT
TCCGATGACC AGATTGTCCA GGAAGTTCTG AACAACTGGC ATGAAAGCAA GAAGCGTATT
CCTGCTAAGC GGTGGCACAG GGGGCTTGTA TGGATGCGGG AAAAACGATT GACACCTACG
GACGCCTTTG GGCAAGGAGC CGTGTGA
 
Protein sequence
MISQSQLESY LWGAATLLRG YIDAGDYKQF IFPLLFYKRL CDVYDEELAD ALEESGGDQE 
YAALPEQHRF QIPEDAHWKA TRTKVKNVGK VIQDALRAIE TANPDTLYGV FGDAQWTNKD
RLPDRMLREL IEHFSSQTLS LSNCPEDELG VGYEFLIKKF ADDSGHTAAE FYTNRTVVHL
MTEMLEPRPG ESIYDPTCGS AGMLLSAVAH LKRQNKEWRN LRLFGQERNL LTSAIGRMNL
FLHGIEDFRI VRGDTLANPA FVEGDRLKQF DVVLANPPYS IKQWDRDAWS ADSWGRNLYG
TPPQGRADYA FWQHIIKSMK AKSGRCAILF PHGVLFRNEE LAMREKLVAH DVVECVLGLG
PNLFYNSPME ACVVICRMNK PKERRNKVLF INAVNEVTRE RAQSFLTDDH IQHIVAAYQT
FGDEDGFARV VGDDEIREKG SNLSIPLYVR ADNSNAQERS ETFGLQQAIA DWQKSSKALR
KSMDYLFGIL EGVSSKTDAP IRTITKKTIH KERVVQPAFK RAVLAAEVTS KLHMEPTFGS
VKHEKIVFLC EKMLGLSEAL EHHHLRQAAG PYDPKARRST DRTFTKNKWF IIKKNGKRIE
YLKGEKFGSH EGYFERYFPR ESKYIHDIVE LLRAATTEQC EIVATLFSAW HDFLDQGTAP
SDDQIVQEVL NNWHESKKRI PAKRWHRGLV WMREKRLTPT DAFGQGAV