Gene Pcar_2911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2911 
Symbol 
ID3725617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3397301 
End bp3399481 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content57% 
IMG OID637752521 
Producthypothetical protein 
Protein accessionYP_358316 
Protein GI77920501 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA CCATTCGCAG ACCGAGGCGA TTTGACCTGC TGGCGGCGGT GAAAGGGGTG 
GCTGCCCAAA CGGGTAAGGA GGCCGCCATT TGGTTGTTTG CTCTAAAACA GACCTTGGCC
GTACTGCTGG CCATGTGGGT ATCCCTGCGT TTCGAACTGG GGCAACCGTC AACGGCGATG
GTTACCGTTT ATGTCCTCAT GCATCCGCAA TCCGGCATGG TCCTCACCAA AAGCGCTTAT
CGTATCTTGG GGACCCTCTT CGGCGCAGCG GCCTGTCTGG TTCTCTTTGC CCTGTTTCCG
CAGCAAAGGG TCCTTTTTTT GCTGGGCTTG TCGCTGTGGG TAGGGTTCTG TACCGCAGGT
GCCGCCCTTA ACCGCAATTT TCGCTGTTAC GGTTTCACCC TGGCAGGTTA CACCGCAGCC
ATGGTCGGGC TAAGCCTTGT CAATCATCCG ATGTCCTTTT TCGCTTATGC AAGCAATCGC
ATTTCCGAGG TCGCGGTCGG GATTCTCTGT GCCGGCTTGG TCGGCGACCT GATTTTTCCG
CAACATCTTG GCAGCACCAT TGTGCGCAGC GTACAAAGCC GCTATACGGA ATTTTGCGGC
TTTGTGCAGG CTCTGTTCAC AGGAAAGATG AGCCCCCGGG ATGTTGAGGG CACGCATCTG
CGCTTCATCC ATAGCGTGCT TACCCTCGAA TCCCTGCGCG GCGCCTCCCT CCTGGAAACA
ACGCAAACAC CCCGGGGGGA TGCCCGCCTG CGCCGGATGA ACAGGGATTT CATGGCGGCA
TCGACCACCC TCCATTCGAT TGACCAGCTT ATGAAACGAT TGCAGAAGGC CGAATCTCCA
GCCGCTCCGG GACTGGTTTT GCTGGCTGAA TCGTTGGCCG AGGCCCTGCT CAATGATGGT
GAGCCTGCCC GTACCGAAGC GGAGGCACAC CGATCCTCAC GGCGTATTGC CGCCTACAAT
GCGACCCTGG ATGAGAGGGT GGCGGCTCTG CACCATGATC TCGGCACTCC TCCGGATAGC
CCAACGACTC TTGATTTTGT TACCGGCGTC GAACTGATCC GGCGTCTGGC ACAGGAGATT
CAAGACTACA CCGGAGCCTA TGCCGCCGGG CCGGAGGAAC ACAGCCCCCT GGGGAGTGAA
GACCTGCATT TCGCTTCCCG TACCGATCCC GCGGTAGCAA TCCTGAACGG TATTCGCGCC
ATGCTCACAT TGTTTCTGAT CTCGATGTTC TGGATCGGCA CGTCCTGGCA GTACGGGAAT
GTCGCCGTGA TGAGCGTAGC TATCGGGTGC TCCCTGTTCG CCCCGGCCCC CGACCCCACC
AAAGCATTGA CAGGAGGTCT TATCGGCCAC GCATTGGGTT TCCCGGCGGC ATTTATCTGT
AAATTCTTGA TTTTGCCACA TCTGAGCGGA TTCGGCATGC TGTGCGCCGT CCTGGTTCCG
TTTCTGCTTG TCGGATCATG GCTGGCCATG TCACCGAAAA CCGCCAATTA CAGCCTCGCC
TACAGTGTCA TGGTATGTTT CATGATCGCA CCGAGCAACA GCATGCAGTA CGATCCCATG
TATATGCTCA ATTTCGGCAA TGCGCTGATG CTCGGTTTGG CTGCTGCCGC GGTTATGTTC
GCAATTTTTA TACCTCCGAC CGGCTCTTGG TTCAAACACC GCATTCCCAA AATGCTGCGA
CGGCAGGTAT TGAAGGTCTG TTCCGCTCCG TTGTCCGGGC TTGAACATCG TTTCGAGAGC
GGCACCCGCG ACCTGTTGCA GAAAATCGCC GCCGGACAAA GTGCTCAAAA CTCTCCGGAT
CAAAACGCCC TCGATTGGAT GTTCCTGGCC TTGGAGACAG GTCGCGCCGT GATTCACCTG
CGCCAGGCAG CGCAAAACAT GTCACAGCAA CTACGCCTCA AAGAAGTTGA TGAAAGCATC
GCTTTAATCC AACAACTGTT CCGGCGACCG ACCGGCGGCA ACCATGCCGC AGCCATTACC
GGCGTTGAGA ATGCCATCGA TGCTATCCGC TCACAGCAGA ATCGCGAAAC TGCCGGGCAT
CTTCTGGATG GCGACCTGCA CCAGATGACG ACCTCCCTCC ATTTTATTCG TATAGCCCTG
CTTGATGATG AAACCGCTCT GGCAGCCAGC ACCAACGGCC CCGCCCCGCG CCACCGAGGA
GAGATTTCGT ATGCCGCGTG A
 
Protein sequence
MKSTIRRPRR FDLLAAVKGV AAQTGKEAAI WLFALKQTLA VLLAMWVSLR FELGQPSTAM 
VTVYVLMHPQ SGMVLTKSAY RILGTLFGAA ACLVLFALFP QQRVLFLLGL SLWVGFCTAG
AALNRNFRCY GFTLAGYTAA MVGLSLVNHP MSFFAYASNR ISEVAVGILC AGLVGDLIFP
QHLGSTIVRS VQSRYTEFCG FVQALFTGKM SPRDVEGTHL RFIHSVLTLE SLRGASLLET
TQTPRGDARL RRMNRDFMAA STTLHSIDQL MKRLQKAESP AAPGLVLLAE SLAEALLNDG
EPARTEAEAH RSSRRIAAYN ATLDERVAAL HHDLGTPPDS PTTLDFVTGV ELIRRLAQEI
QDYTGAYAAG PEEHSPLGSE DLHFASRTDP AVAILNGIRA MLTLFLISMF WIGTSWQYGN
VAVMSVAIGC SLFAPAPDPT KALTGGLIGH ALGFPAAFIC KFLILPHLSG FGMLCAVLVP
FLLVGSWLAM SPKTANYSLA YSVMVCFMIA PSNSMQYDPM YMLNFGNALM LGLAAAAVMF
AIFIPPTGSW FKHRIPKMLR RQVLKVCSAP LSGLEHRFES GTRDLLQKIA AGQSAQNSPD
QNALDWMFLA LETGRAVIHL RQAAQNMSQQ LRLKEVDESI ALIQQLFRRP TGGNHAAAIT
GVENAIDAIR SQQNRETAGH LLDGDLHQMT TSLHFIRIAL LDDETALAAS TNGPAPRHRG
EISYAA