Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2892 |
Symbol | |
ID | 3725598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | - |
Start bp | 3379133 |
End bp | 3380632 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637752502 |
Product | hypothetical protein |
Protein accession | YP_358297 |
Protein GI | 77920482 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 74 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAG TAAACATGTT GCCCGGAGTC CGGGTTGAAG GCGTTGAAAT CGGCGAAGCG CTGCATTTTT CGCAGTTACG AATCGTGCAG CAGCTGGATG CGCCAAGCCA GTGCGAAGTA AGCTGGAACG CTCCAACTTC GGAGCCCTCT TTTTTGGCAA AGATCGCCGC GGAACCGGGG GCTTCGCTGA GTGTGCAGAT CGATACGCAG ACGTCCCCGG TGTTTGACGG GGAGATCTCC TGTGTTGAAT ATCTGCATGG GCCGTCCGGT ACTCTTACGC TGCGTGTGCG GGCCTACGAT GTCTTGGGCC GTTTGCAGCG TCGGCAGGGA GTCCGTACCC ATGTAGAGGT GACTACCGCC GAATTGGCTC GTACCCTTGC TGCCGAGGTG GGGGTCTCCA CCGACGCAAG CAGCAAGGGA CCGGTCTGGT CGCGTATCGT ACCCCGCTTT GCACATGACC TTGCTCTGTT GCGTGAGTAT GCCGCCCGTA GCGGCCTGCA TTTTTACGTA CAGGACGGGA CGCTGCAACT GTTTGCTCCT CAGTCAGAGA CAGCCCATAT CCTGGAACTG GCTTTGGGCG AGAATCTGTT CGAGGCACAC GTTGAGCGCA ACCCTGTTGG TGCCGTAAGC ACGGTGCGGT TACTTGGCTG GGACCCGCAT ACCGGCGAAT CACGCCAGGT TCAAGCGCAG GGCGCGGCAT CATCCTTCGC AAGGGGTACC GGGGAACGGG TTCTTCTGGG AGCGCCTGTA GAGAGCGACG GCGAGGCGGA GGCCCTGGCA GCTGCCGAGT TGAATCGTAG TCAAGCCAGC GCCATGGTGT TATGGGGCGT GGCTGAGGGC GATGTAGCCT TGCGGCCGGG ACGCTGGGTG CGGGTGCGAG GGGTGGCTGA AGGGATGGAA GGGCCGTATC TGCTCAGGAC GGTGGTGCAC ACCCTGGATA TCGCCAGCGG CTACGTTTGT GAAATCGACA CCCGGCCGGA GTTGCCTGAT CGCCCGCAGA GTGTGCCGGC CCTGGTAACG GCCGAAGTAT GTGATGTGGA CGATCCGCAG GGCCAGGGCC GCGTGCAGGT CAGTCTGGAC AGTTACGGCG ACGCTTTGAG TACCTGGATG ATGGTTTTGC AACTTGGGGC GGGGCATGAC AAGGGTGTGA TGGTTTTACC CGAAACGGGG GACCGGGTAT TGGTGGCCCT TCCGGACGGC GACCCCTCGC GGGGTGTTGT TCTCGGTGGC TTGTTCCACA CCGATGGCCC GCCTCGCGAC CCGGAGGCCG TAACGGGTCG CGGCAAACAT CGGCCTTACA CTCTGGCAAC CCGCGGCGGT CAACGTATCC GCCTGAACGA CGCTGACGGC TCCATCCGCC TGCAGAACGC GGAGGGTAGT TTCCTGTCTC TCACTCCCGA AGGCTTGCTG CTGCACGCCG AGGGCGAGTT GGTGATCGAG GCACCGGGAA ATCGCCTGGT TCTCGGAGCC GATCGCATCG ACATGCAACG GAGAACATGA
|
Protein sequence | MKQVNMLPGV RVEGVEIGEA LHFSQLRIVQ QLDAPSQCEV SWNAPTSEPS FLAKIAAEPG ASLSVQIDTQ TSPVFDGEIS CVEYLHGPSG TLTLRVRAYD VLGRLQRRQG VRTHVEVTTA ELARTLAAEV GVSTDASSKG PVWSRIVPRF AHDLALLREY AARSGLHFYV QDGTLQLFAP QSETAHILEL ALGENLFEAH VERNPVGAVS TVRLLGWDPH TGESRQVQAQ GAASSFARGT GERVLLGAPV ESDGEAEALA AAELNRSQAS AMVLWGVAEG DVALRPGRWV RVRGVAEGME GPYLLRTVVH TLDIASGYVC EIDTRPELPD RPQSVPALVT AEVCDVDDPQ GQGRVQVSLD SYGDALSTWM MVLQLGAGHD KGVMVLPETG DRVLVALPDG DPSRGVVLGG LFHTDGPPRD PEAVTGRGKH RPYTLATRGG QRIRLNDADG SIRLQNAEGS FLSLTPEGLL LHAEGELVIE APGNRLVLGA DRIDMQRRT
|
| |