Gene Pcar_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2892 
Symbol 
ID3725598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3379133 
End bp3380632 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content61% 
IMG OID637752502 
Producthypothetical protein 
Protein accessionYP_358297 
Protein GI77920482 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01646] Rhs element Vgr protein 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAG TAAACATGTT GCCCGGAGTC CGGGTTGAAG GCGTTGAAAT CGGCGAAGCG 
CTGCATTTTT CGCAGTTACG AATCGTGCAG CAGCTGGATG CGCCAAGCCA GTGCGAAGTA
AGCTGGAACG CTCCAACTTC GGAGCCCTCT TTTTTGGCAA AGATCGCCGC GGAACCGGGG
GCTTCGCTGA GTGTGCAGAT CGATACGCAG ACGTCCCCGG TGTTTGACGG GGAGATCTCC
TGTGTTGAAT ATCTGCATGG GCCGTCCGGT ACTCTTACGC TGCGTGTGCG GGCCTACGAT
GTCTTGGGCC GTTTGCAGCG TCGGCAGGGA GTCCGTACCC ATGTAGAGGT GACTACCGCC
GAATTGGCTC GTACCCTTGC TGCCGAGGTG GGGGTCTCCA CCGACGCAAG CAGCAAGGGA
CCGGTCTGGT CGCGTATCGT ACCCCGCTTT GCACATGACC TTGCTCTGTT GCGTGAGTAT
GCCGCCCGTA GCGGCCTGCA TTTTTACGTA CAGGACGGGA CGCTGCAACT GTTTGCTCCT
CAGTCAGAGA CAGCCCATAT CCTGGAACTG GCTTTGGGCG AGAATCTGTT CGAGGCACAC
GTTGAGCGCA ACCCTGTTGG TGCCGTAAGC ACGGTGCGGT TACTTGGCTG GGACCCGCAT
ACCGGCGAAT CACGCCAGGT TCAAGCGCAG GGCGCGGCAT CATCCTTCGC AAGGGGTACC
GGGGAACGGG TTCTTCTGGG AGCGCCTGTA GAGAGCGACG GCGAGGCGGA GGCCCTGGCA
GCTGCCGAGT TGAATCGTAG TCAAGCCAGC GCCATGGTGT TATGGGGCGT GGCTGAGGGC
GATGTAGCCT TGCGGCCGGG ACGCTGGGTG CGGGTGCGAG GGGTGGCTGA AGGGATGGAA
GGGCCGTATC TGCTCAGGAC GGTGGTGCAC ACCCTGGATA TCGCCAGCGG CTACGTTTGT
GAAATCGACA CCCGGCCGGA GTTGCCTGAT CGCCCGCAGA GTGTGCCGGC CCTGGTAACG
GCCGAAGTAT GTGATGTGGA CGATCCGCAG GGCCAGGGCC GCGTGCAGGT CAGTCTGGAC
AGTTACGGCG ACGCTTTGAG TACCTGGATG ATGGTTTTGC AACTTGGGGC GGGGCATGAC
AAGGGTGTGA TGGTTTTACC CGAAACGGGG GACCGGGTAT TGGTGGCCCT TCCGGACGGC
GACCCCTCGC GGGGTGTTGT TCTCGGTGGC TTGTTCCACA CCGATGGCCC GCCTCGCGAC
CCGGAGGCCG TAACGGGTCG CGGCAAACAT CGGCCTTACA CTCTGGCAAC CCGCGGCGGT
CAACGTATCC GCCTGAACGA CGCTGACGGC TCCATCCGCC TGCAGAACGC GGAGGGTAGT
TTCCTGTCTC TCACTCCCGA AGGCTTGCTG CTGCACGCCG AGGGCGAGTT GGTGATCGAG
GCACCGGGAA ATCGCCTGGT TCTCGGAGCC GATCGCATCG ACATGCAACG GAGAACATGA
 
Protein sequence
MKQVNMLPGV RVEGVEIGEA LHFSQLRIVQ QLDAPSQCEV SWNAPTSEPS FLAKIAAEPG 
ASLSVQIDTQ TSPVFDGEIS CVEYLHGPSG TLTLRVRAYD VLGRLQRRQG VRTHVEVTTA
ELARTLAAEV GVSTDASSKG PVWSRIVPRF AHDLALLREY AARSGLHFYV QDGTLQLFAP
QSETAHILEL ALGENLFEAH VERNPVGAVS TVRLLGWDPH TGESRQVQAQ GAASSFARGT
GERVLLGAPV ESDGEAEALA AAELNRSQAS AMVLWGVAEG DVALRPGRWV RVRGVAEGME
GPYLLRTVVH TLDIASGYVC EIDTRPELPD RPQSVPALVT AEVCDVDDPQ GQGRVQVSLD
SYGDALSTWM MVLQLGAGHD KGVMVLPETG DRVLVALPDG DPSRGVVLGG LFHTDGPPRD
PEAVTGRGKH RPYTLATRGG QRIRLNDADG SIRLQNAEGS FLSLTPEGLL LHAEGELVIE
APGNRLVLGA DRIDMQRRT