| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2821 |
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| Symbol | vgrE |
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| ID | 3725526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3292979 |
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| End bp | 3295051 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637752430 |
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| Product | Rhs element protein VgrE |
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| Protein accession | YP_358226 |
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| Protein GI | 77920411 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCAC AGAATGCCGC CAACCTTTCC CTGAACAGGG CGGCCAACAT AAGTCATTTT
GGATTCCGGA TCCGCTCCGT GCCGGATGAC ACCTTTACCG TAACCGGTTT TTCCGGCAAG
GATCACGGTA TATCGCAAGA TTTTCGTTTT ACCCTGACGC TCACGGCCCA GGCGGAACTG
ACGGCTTCGA CGGTCGTCGG CAACCGTGCC ACCATGGAGA TGCGATGGGG AGGGACTCCC
CTTTTTCTAC ACGGCCTCGT GGACCACTTT TCCAGGGAAA ACGATACCCC GGAAGCCATG
TGCTACCAGG TCATCTTCAC CTCGCCCCTG TCCCTGCTAA AACAGAACAC CAACAACCGG
GTTTTTCTGA ATCGCACCGT TCCCCAGATC ATCGGCGATA TTTTGCGCAG CGCCGGCTTC
GAGCAGGACG ACTATGCCGT CGACCTGACC GAAACCTATC CCCTTCGGGA ATTCGTGATT
CAATATGCCG AAACCGATTT TGCCTTTCTG TGCCGCCTGC TGGCACGCTC CGGCATCTTT
TTTATGTTTG AAAGCGATGC GGAAAAATCC CGCCCCCGTT TCTGCGATCG AAGCGCGGCA
CGCCCTGCGT TACCTGGGGT CAGCGCATTG CGCTATCAGC CGCAAACCGG CACCGCCCGT
GCCGTCGAGA CCATCTATGC CCTGCATAGC CATGCCCGCC TGCTCCCTGG TACAGTCCGC
GTTACCGACT ACAACTACCG AACCCCCGAG ACGTTACTCG AAGCCAGCCA ACAGTCGGCC
ATGGGTGCCG CCCTCGGCGA AAACGCGGTG TACGGGGATC ACTTCAAAAC GATTGAAGAG
GGCCAACGCA TGGCTTCCAT TCGCGCTCAG GCCCTCGACA CGGAGCGCAT GGTCTACGTG
GGAGAGACGG ACTGCCGTGG ACTGCTGCCG GGATACCGCC TCAAGATCAC CAATCATCCC
CTGCCCGCCA TGAACGACGA CTACCTGGTG GTCAGCGTGG AGCACACGGC CGACCAGGGT
GCGGCACTGG CCTTTGGAGA GGAGGCCAAA GGCCCCACCT ACACCAACCG AGTCCGCCTG
ATCAAGGCCG CAACGCCTTA TCGGTCGCCG ATTCCCAAGC ATCGCCAATT GGTCGGGACC
TTTACCGCGC GTATCGAGAC CACAGGTACC GAATACGCCT ATCTCGACGA GCAGGGGCGA
TATCATATCC GCGTCGATTT CGACCGGGGC GATGCCGAAG CGGGACAAGC CAGCCATCCG
GTGCGCCTCA TGCAACCCTA CGGCGGCGAC AACTACGGCA TCCATTTTCC CCTGCGGTCC
GGCACCGAGG TCGCGGTCAC CTGCGTCAAC GGCGATCCGG ACCGCCCGAT TGTGACCGGC
GCCCTGCCCA ATCCCCAAAA CCCTAATGTC GTCACCTCCG ACAATCACAC TCAGAACATC
ATCCGCACCG TCAGCGGCAA CGAACTGCTG ATGGAGGACC GCCAGGGCCA GGAAAAGATC
GAACTCTTCA CCGCCGAGCG CAAAAACATC CTCACCCTCG ACGCCAACAG CGACGGGCAC
AAGGTCCGTC TGGCCACTGA AGAGGGCAAG ATGGAGATCG CGGCCTGCAA AACCATGTTG
ATCGAATCGG GCGACACCCA AACGGTGCAG TCCGGAAACG ACCACATCGT CACGGTGGAA
AACTCCCAGC GAATGATGAC CCGCAACAAA GAGATAGCCT ACCAGGCCGC CACCGATTTC
CGCCTCAAGG CCGGGGACAA CATCCAATTC AAAGCGGAAA AGCAGAACAT CGCCATGACC
GCCGGCAAGG ACATGGTGGT GGACGTGGCA CGAAGCTTGT CCATGGAAGT GCGCAACAGT
GACATGGAGC TGCTTGTGAA CCGCGGCAAC CTGCATATCA AAACCGCAAG GGACACCAGC
GTGATCGGCC AGGGCGGCGG CACCATCACG ATTACCCAGC AAAACGGCAC CATTCAAATC
ACCAAAGATG GAGACCTTGC CATTTCGGCC GGCAAGATCA CCATCCAGGG CAACAGCATT
AACCTCAAAG CCGGCAAAAT CAGCGAAAAC TGA
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| Protein sequence | MTPQNAANLS LNRAANISHF GFRIRSVPDD TFTVTGFSGK DHGISQDFRF TLTLTAQAEL
TASTVVGNRA TMEMRWGGTP LFLHGLVDHF SRENDTPEAM CYQVIFTSPL SLLKQNTNNR
VFLNRTVPQI IGDILRSAGF EQDDYAVDLT ETYPLREFVI QYAETDFAFL CRLLARSGIF
FMFESDAEKS RPRFCDRSAA RPALPGVSAL RYQPQTGTAR AVETIYALHS HARLLPGTVR
VTDYNYRTPE TLLEASQQSA MGAALGENAV YGDHFKTIEE GQRMASIRAQ ALDTERMVYV
GETDCRGLLP GYRLKITNHP LPAMNDDYLV VSVEHTADQG AALAFGEEAK GPTYTNRVRL
IKAATPYRSP IPKHRQLVGT FTARIETTGT EYAYLDEQGR YHIRVDFDRG DAEAGQASHP
VRLMQPYGGD NYGIHFPLRS GTEVAVTCVN GDPDRPIVTG ALPNPQNPNV VTSDNHTQNI
IRTVSGNELL MEDRQGQEKI ELFTAERKNI LTLDANSDGH KVRLATEEGK MEIAACKTML
IESGDTQTVQ SGNDHIVTVE NSQRMMTRNK EIAYQAATDF RLKAGDNIQF KAEKQNIAMT
AGKDMVVDVA RSLSMEVRNS DMELLVNRGN LHIKTARDTS VIGQGGGTIT ITQQNGTIQI
TKDGDLAISA GKITIQGNSI NLKAGKISEN
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