Gene Pcar_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2815 
Symbol 
ID3725520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3284548 
End bp3286089 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content57% 
IMG OID637752424 
Producthypothetical protein 
Protein accessionYP_358220 
Protein GI77920405 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGC AGAATACGGC ACCGAGCAAA AGCAAACCTC AAGAAGAAGT CCTTCTTGAC 
AACGAGAACT CCTACGAACG TTTATGCGAG CTGGTCGACA TCGCTCCCCT GAACGAATCG
ATCAAACTGA ACAGCTTTGC CGACGCGTCC CGAATGGCGG ATATTTCCCT GCAGGAACGG
CTGACGGCCG GCATCCAGGT GTTTCTCGAC CTGGCAACCC GGAACAATTC CCAGATCGAA
CGGATCGACA AAACCCTGCT CGACCAGTAC ATCGCCCAGA TCGATCAGAC CATCGGCAAT
CAACTGGATG TCATTCTTCA CCACCTGGAT TTTCAGAAGA TGGAGAGTGC CTGGCGCGGC
CTTCAATTCA TGGTCGACCG CTGTGACTTC CGCTGCAACA CCAAAGTGGA AATCCTCGAC
TGCTCCAAGG AGGATCTGCT GGAGGACTTC GAGGAAGCCC CCGAAATCAT CCAGACCGGT
CTCTACAAGC ATGTCTATGT CAGCGAATAC GACACGCCCG GCGGTCAGCC CTTTTCCAAC
ATTGTCGCGA ACTTCGAATT CGACAGCTCG GCCCAGGACG TCACCCTGCT GCGCGAAGCC
TCCAAGGTTT CGGCCAGTGC CCACTGCCCC TTCCTGGCGT CGGTCGGTTC GAAATTTTTC
GGCAAATCCA GCGTCGAGGA AATCGCCAAG ATCAACGACC TGTCCAACTA CATGGAAAAG
GCCGAGTTCA CCCGCTGGAG AAGCTTCCGC GAAACGGAAG ACAGCCGCTA CGTGGGTCTG
CTGACTCCCC GATTCCTGCT GCGCCTGCCC TACGGCCAGG ACACCATTCC GGTCCGCACC
TTCAATTATG AAGAAAACGT CAGCGCCGAG GACCACCGCA GCTATCTGTT CGGCAACCCG
GTCTTCGCCT TCGCCGGCAA CATCGCCCAG AGCTTCGCCA AACACGGCTG GGCCGTCAAC
ATCCGCGGTC CGGAAGCCGG AGGGAAAGTT GAAAATCTGC CGGTGCACCT GCACGACAGC
GGGAAGGGCA TGCAGATCAA GATGCCCACG GAAATGCTGG TTTCCGAAAC CCGCGAACTG
GAAATGGCCA ACCTCGGCTT CATCCCCCTG AGCTATTACA AAAACAGCGA CTTCGCCTGC
TTTTTCTCCG CCAACTCGGT GCAGAAACCG AGCGAGTACG CCAACACCGA GGCCAACGCC
AACAGCATGA TCAACGCGCG GCTGCCCTAC ATCTTCCTGG TGTCGCGGCT CGCTCATTAT
CTCAAGGTCC TGCAGCGGGA AAACATCGGC TCGTCCAAGA GCCGCCAGAA ACTGGAAAAC
GAACTGAACG CCTGGATCCA GACCCTGGTG ACGAAAATGA AGGACCCCGA GCCGGAACTG
ATCGCCACCC ACCCCCTGCG GGACGGCCAG GTAACGGTGC GGGAAATCCC GGAAAACCCG
GGCTACTACA GCGTCGACCT GTTTGTCCGG CCGCATTTCC AGATCGAGGG GGTGGACGTG
CAGTTGAAAC TCGTGGCGCA GATGCCGCGG GATAATAAAT AA
 
Protein sequence
MNMQNTAPSK SKPQEEVLLD NENSYERLCE LVDIAPLNES IKLNSFADAS RMADISLQER 
LTAGIQVFLD LATRNNSQIE RIDKTLLDQY IAQIDQTIGN QLDVILHHLD FQKMESAWRG
LQFMVDRCDF RCNTKVEILD CSKEDLLEDF EEAPEIIQTG LYKHVYVSEY DTPGGQPFSN
IVANFEFDSS AQDVTLLREA SKVSASAHCP FLASVGSKFF GKSSVEEIAK INDLSNYMEK
AEFTRWRSFR ETEDSRYVGL LTPRFLLRLP YGQDTIPVRT FNYEENVSAE DHRSYLFGNP
VFAFAGNIAQ SFAKHGWAVN IRGPEAGGKV ENLPVHLHDS GKGMQIKMPT EMLVSETREL
EMANLGFIPL SYYKNSDFAC FFSANSVQKP SEYANTEANA NSMINARLPY IFLVSRLAHY
LKVLQRENIG SSKSRQKLEN ELNAWIQTLV TKMKDPEPEL IATHPLRDGQ VTVREIPENP
GYYSVDLFVR PHFQIEGVDV QLKLVAQMPR DNK