Gene Pcar_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2784 
Symbol 
ID3725489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3247166 
End bp3248317 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content61% 
IMG OID637752393 
ProductABC-type transporter, ATPase component 
Protein accessionYP_358189 
Protein GI77920374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000307726 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGT TACTTGAGGT TCAAAACCTG CACGTCGATC TGGGGGAATT CAGCTTGCGA 
GGTGCCGACC TCGCTATCGC GGAGGGGGAT TACTGCTGCC TGATCGGTGA TTCGGGAGCC
GGTAAAAGTG TGCTGTTGGA GACCGTAGTG GGCAGCTTCC GCCCCCACCG GGGAAAAGTC
CTGCTGCATG GCCAGGATGT CACCAACTGC CCCCCTGAAC TCCGTAACCT CGGCATCGTT
TATCAGGATT ACATGCTCTT TCCCCATCTG AACGTGTTCG ACAATATCGC TTTCGGATTG
CGGCGCCAGA AAGGTTCCCG CACCGAGCTG AAAAACGAGG TCAACACCAT TGCAGCCAGG
GTCGGTATCG AACATCTGCT GCATCGCGAC ATCAAAACCC TTTCCGGCGG CGAGCAACAA
CGCGCCGCGC TGGCCAGGGC ACTCATAACC CGGCCGCAAG TGCTGCTGCT CGATGAAGCC
TTCAGTGCAT TGGACGTAGC CAGTCGGGAG CGGATGCGGC GTCTGCTGCG GGAGCTGGTC
AAGGACCTGC ATGTCACCGT ACTGCATGTC ACACACGACA TGGAAGACGT CTGGGCGCTT
GCCGACCAGG TGGCAGTCCT GCACGATGGG CAAATCCTGC AAACGGGCAG CCCCGAGCAC
ATTTTCAGCT GTCCGCAGCC CGGGTTTGTC GCGGAATTCC TCGGGGCTCG CAACGTCCTG
CACGGTTCCG TTCTGCAATG CGATGCATCG GGGTTGACCC ATGTCGCCGT CGGCCAGATT
GATCTGTTCA GCGCCGATCA GGCAGCGGTC GGCCGCGAGG TTCATCTTTC CGTGCGCCCG
GAGGAACTCG CCGTCGCCCG GCAACAACTG CCCATCACCC TGCGCAATCA GATCCCGGTA
AAAATACGCC ACCTGGAACG CCGGGGTCCT CTGGTCTGGG TCACCGGAGA AGCCGCCGGG
TTCTCTCTCG AAGCCGCCGT GACGGTTTCC GGGGCGCAAG AACAGGAACT GAAGGTCGGC
GACGAAGCGG TCTTCGCCTT TTCCGCAAGC AGCTTGCGCG TCATCGCCCC GGAAAACCAG
GCCCACTCAA ATCGACTTGA AGGTCTTTCC GCCGAACCGT TGCCGGCGTT GGAAGCAATG
GCAGGCGGCT AA
 
Protein sequence
MTVLLEVQNL HVDLGEFSLR GADLAIAEGD YCCLIGDSGA GKSVLLETVV GSFRPHRGKV 
LLHGQDVTNC PPELRNLGIV YQDYMLFPHL NVFDNIAFGL RRQKGSRTEL KNEVNTIAAR
VGIEHLLHRD IKTLSGGEQQ RAALARALIT RPQVLLLDEA FSALDVASRE RMRRLLRELV
KDLHVTVLHV THDMEDVWAL ADQVAVLHDG QILQTGSPEH IFSCPQPGFV AEFLGARNVL
HGSVLQCDAS GLTHVAVGQI DLFSADQAAV GREVHLSVRP EELAVARQQL PITLRNQIPV
KIRHLERRGP LVWVTGEAAG FSLEAAVTVS GAQEQELKVG DEAVFAFSAS SLRVIAPENQ
AHSNRLEGLS AEPLPALEAM AGG