Gene Pcar_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2780 
Symbol 
ID3725485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3242221 
End bp3243963 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content59% 
IMG OID637752389 
Producthypothetical protein 
Protein accessionYP_358185 
Protein GI77920370 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0442917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCACT GGACCCCATC CGAAAGCTAT TTCACCAGCT GGGACGGCAC AGAGTTGTTT 
TACCGCAGCT GGCAACCCAC GACCGACAGC AAACAGGCCC TGATCTTCAT TCACCGGGGA
CACGAGCATT CCGGACGTAT CGCCCAACAG GTCGAAGACC TCGGCTTGAC CGATTTCTGG
GCCTTCTCCT GGGACAATCG CGGACATGGT CATTCCCCGG GCCGACGCGG GCATGCCGAC
AGCTACTCCC ATCTGGTCAA AGACCTGGAT ACCTTCGTCC GTTTTGTTTC CGAACGCTAT
GAGATCCCCA TGGAGAACAT CGCCGTGGTG GCCAACAGTG TCGGCGCCGT TACCGCCGCG
ACCTGGGTCC ACGATTATGC GCCGCGCATC CGGGCCATGG TACTGGCCGC ACCGGCCTTT
CGAATCCGCC TTTATGTCCC CCTGGCGATA CCTCTACTGC GGCTGTGGCT CAAAATCAAA
GACAAGGCCT TCGTCAGCAG CTACGTTAAA TCCAAGCTCC TGACCCATGA CCGCGAACAG
GCCCGCCGCT ACGACGAGGA CGAGCTCATC ACCCGGGACA TCGCCGTCAA TATCCTACTC
GGGCTGCATG ATACGGCAAC GCGGATTATC GAAGACGCGG CCGCCATCAT CACGCCCACC
CTGATCTTAT CGGCCGGATC CGACCGGGTG GTGAAAAATT CCGCCCAACA CCGCTTCTAT
CGAAGACTCG GAGCTCCGAC CAAGTGCCTG GAAACCTATC CGGGCTTTTT CCATGCTCTG
CTCTATGAAA AGGATCGCCA GCGACCGATG GCCCATGCCC GCGAATTCAT CCTGCAGGCA
TTCCGCTCCG ACATCGACCG CACAGCCCTG CTAAAGGCCG ACCGGGGAGG GTTCACCCGT
ACCGAATACG ATCTGCTCCG CAGCCCCGCC CCCTGGCTCA AAAAGCTTAA TTTTGCCGCA
CAAAAATTCA TGATGCGTAC TGTCGGAAGC CTCAGCAAAG GTATCCGCCT GGGGAGAAAA
ACCGGTTTCG ATTCCGGTCG TTCCCTCGAT TACGTCTACG AAAACAGGGC CAGGGGTATC
GGCCCTATCG GCAAATTTAT CGACAGGGGA TATCTGGATG CCATCGGTTG GCGAGGCATC
CGCATGCGCC GGCAACATCT GGAAAAACAA TTAACGCGCA CCATCGCCCG CATCACCGAC
TCCGGACAAC CGGTACATTT GCTCGATGTC GCTACCGGTT GCGGGCGCTA CGTGCTGAAT
GTGCTCAAAA ACCACGATGA CCAAAAAATC GATGCTCTGC TGCGCGATTT CACTGCAGCC
AATCTGGAGC AGGGGCATGC CCTTGCCGCT GCAATGGGAC TGGAAAACGT GCGTTTCGAA
CAGGCCGATG CCTTCGACCC GGACACGATT CGCCCACTGC AACCGCGCCC TAATCTGGCC
ATCGTCTCCG GCCTTTATGA ACTGTTCCCC GACAATGACA TGGTCGGTGC GTCCCTGCGG
GGGATCGGGG ATGCCGTCGA ACCGGGCGGT TACCTGATCT ACACCGGACA ACCCTGGCAC
CCTCAAGTGG AGATGATCGC CCGCGTGCTG ACCAATCGGG ACGGCGTTCC CTGGATTATG
CGACGCCGCA GCCAGGCGGA AATGGACGAA CTGGTCAGGC AGGCAGGTTT CGATAAAATC
GCAATGGAGG TCGACCCATG GGGGATATTC ACCGTTTCCG TGGCACGGCG CGTCGCGATC
TGA
 
Protein sequence
MHHWTPSESY FTSWDGTELF YRSWQPTTDS KQALIFIHRG HEHSGRIAQQ VEDLGLTDFW 
AFSWDNRGHG HSPGRRGHAD SYSHLVKDLD TFVRFVSERY EIPMENIAVV ANSVGAVTAA
TWVHDYAPRI RAMVLAAPAF RIRLYVPLAI PLLRLWLKIK DKAFVSSYVK SKLLTHDREQ
ARRYDEDELI TRDIAVNILL GLHDTATRII EDAAAIITPT LILSAGSDRV VKNSAQHRFY
RRLGAPTKCL ETYPGFFHAL LYEKDRQRPM AHAREFILQA FRSDIDRTAL LKADRGGFTR
TEYDLLRSPA PWLKKLNFAA QKFMMRTVGS LSKGIRLGRK TGFDSGRSLD YVYENRARGI
GPIGKFIDRG YLDAIGWRGI RMRRQHLEKQ LTRTIARITD SGQPVHLLDV ATGCGRYVLN
VLKNHDDQKI DALLRDFTAA NLEQGHALAA AMGLENVRFE QADAFDPDTI RPLQPRPNLA
IVSGLYELFP DNDMVGASLR GIGDAVEPGG YLIYTGQPWH PQVEMIARVL TNRDGVPWIM
RRRSQAEMDE LVRQAGFDKI AMEVDPWGIF TVSVARRVAI