| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2759 |
|---|
| Symbol | |
|---|
| ID | 3725464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 3216759 |
|---|
| End bp | 3219053 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637752368 |
|---|
| Product | two component sensor histidine kinase |
|---|
| Protein accession | YP_358164 |
|---|
| Protein GI | 77920349 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00000152723 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTGCG AAGGTTGTAC AATTCTCCAT GAAGTGTTGT GCCTCGCCGT CGGCGGGGAG
GATGCCCCGC TGCTGAAATG CCAAAAAATA TTAGCTTTGC TGGAACGCTC CTTGCCATTG
GCGGGAGCGT TTTTTTGGTT CCCGGAACCC TTTACCCATC ATGGCAAAAA TTTTTTGGAG
GCCTATGCTT CCCATGATTT TCCGCCATGC CAAAAACCCT CTCCTGATAC TGCGAGTCCT
TTACCTGAAG CCTGTGCGTC ATCGGCGGAA TCCGCGATCC TTCATTTTCC TGCCGGCGAT
GTCGGCAATG ACCTGGGGGT GCTCACCTGC ATCCTTTCCG GTGGTTTGGC CGAGGACAGT
TCTCTGCCGC AATTGGCGCA ATCGTCCAGT CGGGTGTTGG CTGGCCTGGT GCGGGAGCAT
ATCGGTGCGG ACAGGCAGCA GCGTCAAGTG CATGAGCTGG TTCTGCTCGA CAATCTTGCT
CAGGGGTTGA GATGTTCCTT CGCCTTGCCG GTGTTGCTGG ATGAGGTCTG GTCGGTCCTG
GAGGAGGCAG GCGGTATCGC CTGCGCTATT TTGCGCCCTA TGCACGGCGA AACGGTTTTG
GGCAAGTCGC TGGTGCGTAT CGTATCGCAT CGACAGGCCG ATCTCGGCAC CTTTGAAAAA
CTGGAGGCAG AGCTCAGTTG CCGAATCCTT CAGGATGAGC AAATGCAGTT TGTGGCCGCA
TCGGGGGTTT GTTTGCCGCT GATGTTTCAG GGACGCATGA GAGGTACCCT GTTTTTGGTG
GAGGATGGTC GGGCCGGAGC TATGGGGCTG GGTCTCTCTG ATGCGAGCCG TGTTTTTCTG
GAGCGCCTCG GCGCGCAGGT AGCTCAGAAT CTAGAGCGGA TCAAGGCTTT GGAAGACCGG
GCGCTTTTGC TGCAGGATAA CAGCCGTAAG CTGCACGAAA TCTCCTTGCT GTATCGTATT
TCCAGGGCAA TGCACAGTAC CTTGCATCTG GATGATCTGA TGCACCTCAT TCTTTCCGCG
GTTACCATCC CGTGGGGGGG AGGCTTCGAG CGGGCCATGT TGTTTCTGGC CAATGAACGT
AGTGGCGTTC TGCAGGGGAT GGTCGGGGTG ACGCGCCGTT CGGCGCGCTA CCTGTTTCCC
AGGGAGGAAT CCGAGGTAGA GTGGGAATTG CCGCTTATAA CCGAAGGCAT CCGGGAAAGG
CAGCGCCAGG ACGATTTCTG CCAGCTGGTA CTCAAGCAGC GTTTGCCTCT GTCGCCCGAT
GACAATCCTC TGGCCCGTGC CCTGGCTCAG GATGAGCTTG TTGTCGAAAC CGATACCATG
GCTTTTCCGG GGGCTTTCGG TCGCCTCGCC GAAGCGGTCA AGTTGAACGC CTGTGCCCTG
GTGCCGCTGC AGGGGCGCAG CAGGGCTCTG GGGGTTCTGG TTGTCGACAG TGCCTGCATG
TCCAGGGCCG CTTTGATGGA GCGGCGTCGT TTCCTCGAGT TGTTTGCCAA TCAGGCTGCT
CAAGCCATGG AAAACTCCAT GTTGCTGCAT CGTGTCGAAA CATCGCATCG TGACCTTCGT
GAAACCCAGG AGCGACTTAT TCAGGGAGAA AAGATGGCCG CTCTCGGAGA GACCGCCGCT
TCTGTTACCC ATGAGTTACG TAATCCCCTG GTTTCCATCG GCGGTTTCGC CCGGCGCCTG
GCTCGCAGTT TACCTGAAGG CACCCGCGAG CAGGAATACA GTGGAATAAT CGTGCGCGAG
GTACGGCGCA TGGAAGAGAT GCTGACCAAT ATTTTGGGGT TTTCCAAAAA GCAGATGTTG
TGCATCGCCG ACTGCGATCT GATCAAGGTT ATTGAGGAAG TTTTGGTCCT TGAGGAGGAC
GCGCTGCGGG AAGGGGCCGT ACGTCTGGTG AGGGAGCTTA GTGATGATCT GGCTGCCATT
CAGGGGGATG AACAGAAACT TCGTCAGGTC ATCGTCAACC TGGTGGATAA TGCCCGCCAG
GCCATGCGCG ACGGAGGTAT CCTGATCGTG CGAGCGTATC GAACTTCTTT GCGTGGCGAC
CGGGCGGTGG CGGTAGAAAT TGAAGATACC GGGGGCGGTA TCCCGGCGAA TATTCTGCGA
AATATTTTCA ACCCCTTCTT TACCACCCGC AAACAGGGAA CCGGTCTTGG TTTGCCCATT
GTGCATCGTA TTGTAGAGCA CCATCAGGGT GAGATCGAGG TTCAGAATAC GGAGCGGGGC
GCGCGTTTTG TCCTGCGTTT GCCCGAAGCT CCGCCGGCCT GCCTGGTGAT GGATAAACAT
CGACCGTTTC GTTGA
|
|---|
| Protein sequence | MVCEGCTILH EVLCLAVGGE DAPLLKCQKI LALLERSLPL AGAFFWFPEP FTHHGKNFLE
AYASHDFPPC QKPSPDTASP LPEACASSAE SAILHFPAGD VGNDLGVLTC ILSGGLAEDS
SLPQLAQSSS RVLAGLVREH IGADRQQRQV HELVLLDNLA QGLRCSFALP VLLDEVWSVL
EEAGGIACAI LRPMHGETVL GKSLVRIVSH RQADLGTFEK LEAELSCRIL QDEQMQFVAA
SGVCLPLMFQ GRMRGTLFLV EDGRAGAMGL GLSDASRVFL ERLGAQVAQN LERIKALEDR
ALLLQDNSRK LHEISLLYRI SRAMHSTLHL DDLMHLILSA VTIPWGGGFE RAMLFLANER
SGVLQGMVGV TRRSARYLFP REESEVEWEL PLITEGIRER QRQDDFCQLV LKQRLPLSPD
DNPLARALAQ DELVVETDTM AFPGAFGRLA EAVKLNACAL VPLQGRSRAL GVLVVDSACM
SRAALMERRR FLELFANQAA QAMENSMLLH RVETSHRDLR ETQERLIQGE KMAALGETAA
SVTHELRNPL VSIGGFARRL ARSLPEGTRE QEYSGIIVRE VRRMEEMLTN ILGFSKKQML
CIADCDLIKV IEEVLVLEED ALREGAVRLV RELSDDLAAI QGDEQKLRQV IVNLVDNARQ
AMRDGGILIV RAYRTSLRGD RAVAVEIEDT GGGIPANILR NIFNPFFTTR KQGTGLGLPI
VHRIVEHHQG EIEVQNTERG ARFVLRLPEA PPACLVMDKH RPFR
|
|---|
| |