Gene Pcar_2635 details

Gene Information

• Locus tag: Pcar_2635
• ID: 3725338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 3088267
• End bp: 3088935
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637752246
• Product: putative spermidine synthase
• Protein accession: YP_358043
• Protein GI: 77920228
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0421] Spermidine synthase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.00206926
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCTGC CCTGGAAAAC CATCGACCGA TTCGCCACCG AAGACGAGGG GGACCTCGAA 
CTGCGCCAGC GCGGCAAAGG TGATTTTCTG ATTACCGTCG GCCCCCAGAT ACTGATGAAC 
AGCAAAGCGC AACGCTCCGA AATAGCCCTC GGCGAACTCG GTTGTCAGCA CCTGAAAAAC 
CACCCGAACC CGCAGGTGCT GGTCGGCGGA CTGGGGATGG CGATCACCCT GCGCGCGGTA 
CTCGATACCT TGCCCGCAAG CGCCGAAGTT GTGGTGGCCG AGCTGAATCA CAAAATCCTC 
GAATGGTGCA AAGGACCGCT GGCCGAGCTG ACCGACGGGG CCGCAAACGA CCCGCGCGTA 
ACGGTGGAAA TTGCCGATGT CGCCGCGCTG ATCCGCAAAG CGCCCGCCGA GTCTTTCGAC 
GCTATCGTTC TCGACCTCTA CCGCGGCCCC CACCCCAAAA CCGATCGCGT CGGCGATCCG 
ATCTACGGCA GCCGCGCCAT ACAACGGGCA CGTGCCGCCC TCAAACCGGG GGGCGTGTTT 
GCTGTCTGGG GAGAAAACCC CGATGCCGGA TTCGAAGGAC GCCTGGCCGC AGCCGGATTC 
AAGGTCCGCT GCGAACGCCC CGGCAAGGGA GGCTACCGGC ATGCCGTCTG GGTGGCTCAA 
AAGTCGTAA 

 

Protein sequence

MALPWKTIDR FATEDEGDLE LRQRGKGDFL ITVGPQILMN SKAQRSEIAL GELGCQHLKN 
HPNPQVLVGG LGMAITLRAV LDTLPASAEV VVAELNHKIL EWCKGPLAEL TDGAANDPRV 
TVEIADVAAL IRKAPAESFD AIVLDLYRGP HPKTDRVGDP IYGSRAIQRA RAALKPGGVF 
AVWGENPDAG FEGRLAAAGF KVRCERPGKG GYRHAVWVAQ KS