Gene Pcar_2596 details

Gene Information

• Locus tag: Pcar_2596
• Symbol: rfbC
• ID: 3725299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 3046418
• End bp: 3046924
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637752207
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_358004
• Protein GI: 77920189
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 83
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGAAC CGAAAATCTT CGGCGATCAG AGGGGTTTCT TCTTCGAAAG CTTCAACCAG 
AAACAGTGGC AAAACACGAC GGGCCTGAGC ACCCGGTTCG TCCAGGACAA TCATTCCCGA 
TCCGCCAGGG GCGTGTTAAG GGGGCTGCAT TACCAGATCG AGCAGGTTCA GGCCAAATTG 
GTACGCGTCA TCGTCGGCGA GGTCTTCGAT GTTGCCGTGG ACATCCGGCG ACACTCCCCA 
ACGTTCGGCA AATGGGTCGG AGTCCGCCTA TCCGCCGAAA ACAAACGCCA GCTGTGGATT 
CCTGAAGGCT TTGCGCATGG TTTTCTCGTG CTGTCCGAGG TGGCGGAGTT CCTGTACAAG 
ACCACGGATT ATTATGCCCC CGAACATGAA AGAGCCATTA TCTGGAACGA TCCGGATCTT 
GCCATTCACT GGCCCACCGA CGAAGAACCG ACGCTGTCGG AGAAAGACAA AAGGGCTTTA 
CCTTTAAACG AGGCCGAGCT TTTTTAG 

 

Protein sequence

MIEPKIFGDQ RGFFFESFNQ KQWQNTTGLS TRFVQDNHSR SARGVLRGLH YQIEQVQAKL 
VRVIVGEVFD VAVDIRRHSP TFGKWVGVRL SAENKRQLWI PEGFAHGFLV LSEVAEFLYK 
TTDYYAPEHE RAIIWNDPDL AIHWPTDEEP TLSEKDKRAL PLNEAELF