| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2595 |
|---|
| Symbol | rfbA |
|---|
| ID | 3725298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 3045507 |
|---|
| End bp | 3046385 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637752206 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_358003 |
|---|
| Protein GI | 77920188 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 82 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA TTAAAAAAGG CATCGTTCTG GCGGGTGGCG CCGGCAACAG ACTCTACCCC
TTGACCCTGG TGGCGAGCAA ACAGTTGCAG CCGGTCTACG ACAAGCCGAT GATTTATTAT
CCCCTGGCAA CCCTCATGCT TGCCGGTATC CATGATATCC TGATTATTTC AACACCGCAG
GACATCCCCC GCTTCCGGGC ATTATTGGGA AATGGCAGCC GATGGGGAAT CAAACTGTCC
TATGCCGTCC AGCCCGAGCC CAAAGGCATC GCCCAGGCAT TTCTGATCGG GGAAGAATTC
ATCGCCGGCG AATCCGTCTG CCTGATCCTT GGCGACAACC TTTTTTACGG CAAGGTGGGA
CTGGATACGA TCATTGACAA CTTTGCCGGA GGCGCAACGG TTTTCGGCTA TCCGGTCAGC
GACCCGGAAC GCTACGGAGT GGTGCAGTTC GACTCCGCGG GCAAAGCCAT CGGACTCGAG
GAAAAACCGT CAAACCCCAA ATCCCAGTAC GCCATCCCGG GACTGTACCT TTACGATAAC
AAGGTTGTCG CCATGGCGAA GAGCCTGCGG CCCTCCGGCC GCGGCGAACT GGAGATCACC
GATCTCAATC TGGAGTATCT TCGACGGGGG GAACTCCAGG TGGAGAAACT CGGCCGGGGC
ATTGCGTGGC TCGATACCGG AACGCACATG AGCCTGCTGG AAGCCAGCCA TTTCATCGGT
ACCATTGAAG CTCGACAAGG GACCAAAATC GCCTGCCTCG AAGAAATTGC CCTGCGCAAA
GGATTTATCG ACAAAAGCCG GATGACGACC ATCCTTCGCG ACATCCCGCA ATCAAGCTAC
CGCGATTATC TCGAGCAAGT ACTGAGAGAC GAGTTATGA
|
|---|
| Protein sequence | MAAIKKGIVL AGGAGNRLYP LTLVASKQLQ PVYDKPMIYY PLATLMLAGI HDILIISTPQ
DIPRFRALLG NGSRWGIKLS YAVQPEPKGI AQAFLIGEEF IAGESVCLIL GDNLFYGKVG
LDTIIDNFAG GATVFGYPVS DPERYGVVQF DSAGKAIGLE EKPSNPKSQY AIPGLYLYDN
KVVAMAKSLR PSGRGELEIT DLNLEYLRRG ELQVEKLGRG IAWLDTGTHM SLLEASHFIG
TIEARQGTKI ACLEEIALRK GFIDKSRMTT ILRDIPQSSY RDYLEQVLRD EL
|
|---|
| |