Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2594 |
Symbol | rfbD |
ID | 3725297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3044474 |
End bp | 3045418 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637752205 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_358002 |
Protein GI | 77920187 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAATC AAAAACGCCG GGTGGCCATT GTCGGTGCCA GAGGAATGCT CGCCCGCATG GTGCTGCGAT CGGCGCCGTC CGAGTGGGAC ATTGTCGCCC TTAGCCACCC CCAATTCGAC TTGACCGACC GGGCCTCCGC CAGGATGGGG CTGAGTGCCT TTCAGCCTGA TGTCATCATC AACTGCGCGG CCTACACCGA CGTGGATGGT GCGGAATCAA ACGAAGCTCT TGCTTTTTCG GTAAATGCCG TTGGCCCTGG AAATCTGGCA CAGGTCGCCA AAGAGCTCAA CGCAACCCTG GTGCACTTCT CTTCCGACTA TGTTTTCGGC GGCGACAAAA CAGCCCCTTA CCGCGAGACC GACTGTCCGG ACCCCCGGTC GATTTACGGC AAATCGAAGC TCCAGGGCGA ACAGCTGATA CAGGACAGCG GCCTGGAGCG ATTCTTTATC GTCCGCACCA GCTGGCTGTA TGGTCCCGGC GGGAAAAATT TTGTCGAATC CATGATCCGG TTGGCGCAAC AACGCGAAGA ATTGCGTATC GTGGCAGACC AGTTCGGTTC GCCCACCTAC ACAGCCGACT TGACGCAGGC TGCGCTAAAC CTCCTTGCCG AGGAAACAAC GGACACCAGG AAAAAGCGCA CCCCAGATCC CCTTTATGGC ATTTACCATT ACGCCAACGA GGGGCAATGC AGTTGGCACC GGTTTGCGGA AGAGATCGTA TCGCTGCTGA AAACCAACGG AGAAACCATT AAAGCGAAGC TCATTCTCCC TATTCCCACA ACGGCATACC CCTTGCCGGC ACCCCGCCCA TCCTATTCCG TGTTATCCAA AGCAAAGTAC CGAAAGACTA CCGGCGCCAT CGTCCCCAAC TGGCGCCAGG CACTGGCTCG GTATATGGCA AACCGGCTGA ATTCTCAAAG CCACCCCCAA GGCGGAAGCC CTTAA
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Protein sequence | MPNQKRRVAI VGARGMLARM VLRSAPSEWD IVALSHPQFD LTDRASARMG LSAFQPDVII NCAAYTDVDG AESNEALAFS VNAVGPGNLA QVAKELNATL VHFSSDYVFG GDKTAPYRET DCPDPRSIYG KSKLQGEQLI QDSGLERFFI VRTSWLYGPG GKNFVESMIR LAQQREELRI VADQFGSPTY TADLTQAALN LLAEETTDTR KKRTPDPLYG IYHYANEGQC SWHRFAEEIV SLLKTNGETI KAKLILPIPT TAYPLPAPRP SYSVLSKAKY RKTTGAIVPN WRQALARYMA NRLNSQSHPQ GGSP
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