Gene Pcar_2593 details

Gene Information

• Locus tag: Pcar_2593
• Symbol: rfbB
• ID: 3725296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 3043349
• End bp: 3044437
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637752204
• Product: dTDP-glucose 4,6-dehydratase
• Protein accession: YP_358001
• Protein GI: 77920186
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 66
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TATTAGTAAC CGGCGGATGC GGATTCATAG GATCCAATTT TATCCATGTG 
GCCCGGCAAT TTCTCCCGGA CATTGCCATC ATCAACCTCG ACAAGCTGAC CTATGCCGGC 
AACCCATCCA ACCTCCGCGG ACTGGAACAG GGATCCGGAT ACCGTTTTGT GGCCGGCGAT 
ATCTGCGACA TCGACCTCGT GTCCCGGATT TTCACGGAAG AGAAGATTGA CACCGTGGTG 
CATTTCGCCG CCGAATCCCA CGTCGACCGC AGCATCGAGG GGCCCGCCGA GTTCATCCAG 
ACCAATATTG TCGGCACATT CAATCTACTC GAAGCAGCTC GCAAAACCTG GCTGGCGCAA 
CCCGCAGACG AGAACCGCGA TAAGCGCTTC CTGCACGTCA GCACCGATGA GGTTTACGGG 
TCGCTGGGAG CTACCGGGTT TTTCACCGAA ACCACGCCCT ACGATCCGCG CTCGCCCTAC 
TCTGCGAGCA AGGCCTCTTC CGACCACCTG GTCAGCGCCT ATTTTCACAC CTACGGCTTG 
CCCACCCTCA TCACCAACTG CTCAAACAAT TACGGACCGT ATCAGTTTCC TGAAAAACTG 
ATCCCGCTGA TCATCAACAA TGCGCTGAAC GGCAAACCGT TGCCGGTCTA TGGAGATGGC 
AAAAACGTGC GCGACTGGCT CTTTGTCGCA GATCACTGCC ATGCCATCCT CCAGGTGCTG 
GCGCGCGGCA GAATCGGGGA AACCTACAAT ATCGGCGGCA ACAACGAGAG ACAGAACATA 
GAGGTCGTGC ACACGATTTG CGATATTCTG GATGAGAAAG TAGGGTTGTT AGCTTCGGGT 
AAACCCCGGC GGGAACTGAT CTCTTTCGTC AAGGACCGCG CCGGACACGA TCGGCGCTAT 
GCTATCGACG CCTCCAAGAT CGGCAACGAT CCCGGCTGGC AACCAGCGGT TACCTTTGAG 
GAAGGCATTC GCCGAACCAT CGATTGGTAT CTGGACAACC CGGATTGGTC CGCCGCCATC 
CTGGACGGCT CTTACCGGGA GTATTATCAA AAAATGTATG GCGTGAAGCT TGAGACCGTC 
GCCCCCTGA 

 

Protein sequence

MKKILVTGGC GFIGSNFIHV ARQFLPDIAI INLDKLTYAG NPSNLRGLEQ GSGYRFVAGD 
ICDIDLVSRI FTEEKIDTVV HFAAESHVDR SIEGPAEFIQ TNIVGTFNLL EAARKTWLAQ 
PADENRDKRF LHVSTDEVYG SLGATGFFTE TTPYDPRSPY SASKASSDHL VSAYFHTYGL 
PTLITNCSNN YGPYQFPEKL IPLIINNALN GKPLPVYGDG KNVRDWLFVA DHCHAILQVL 
ARGRIGETYN IGGNNERQNI EVVHTICDIL DEKVGLLASG KPRRELISFV KDRAGHDRRY 
AIDASKIGND PGWQPAVTFE EGIRRTIDWY LDNPDWSAAI LDGSYREYYQ KMYGVKLETV 
AP