| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2565 |
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| Symbol | |
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| ID | 3725268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3011908 |
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| End bp | 3014019 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637752176 |
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| Product | two component signal transduction response regulator |
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| Protein accession | YP_357973 |
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| Protein GI | 77920158 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC CGTTGAACCT GCTGCTTGCC GAAGATTGTG AAGACGATGC GCTGTTGCTG
ATAAGGGCCC TGCGTCATGG CGGCTATCGT CTGACCGTTG AGCGGGTTGA GACGGCCGAG
GCCATGCGCG CGGCCTTGGC CACGGGGAAG TGGGACCTGA TCATATCCGA TTATTCCATG
CCCCGGTTCA GCGCCCTGGC GGCCCTCGAG GTCGCCCGGG AAAATGGCCT GGATTTGCCG
TTTATCGTAC TGTCCGGCAA TATCGGCGAA GAAACCGCCG TTGAAGCCAT GCGCGCCGGC
GCTCACGATT ATGTGATGAA AGGGAACCTG GCGCGACTGT TACCGGCTAT CGAGCGGGAA
TTGCGCGAAG CCGAAGAGCG TCGCCGGCGC CGCCGAGCCG AGTTGGAATT GCGCAACAGC
GAAAAACTGT TCCGATCCAT TTTCCAGAAT GCCGTTACCG GCATGGCGAC ATGTTCGCCC
GACGGACGCT TCCTGAAAGT GAATCCGGCC TTGTGCGAGA TGCTTGGCTA CAGCGAAAAC
GAACTTTTCG GCGTTTCGGT ACTGGACATC ACCCATCCCA CCGACATTGA GCTTACCGAA
CGTCTGTTTG CCGAGGCAAT GGGGGGGCAG ACGCGCTCCC ATGACTACGA AAAACGCTAT
ATCCGTCGAG ACGGCGAAAC CCTCTGGGCA CATGTGTCCA CCTCCTGGCA TTATAACGAG
GACGGCACTC CCTCTTACAG TGTGGCGCTG ATCAGCAACA TTACTCCTCA TCACCAGGCC
AAACAGAAAA TCCGTCAACT GGCTTATTTC GACGGTTTGA CAGGCCTGCC CAATCGGCAG
TTGTTTCTGG AACACTGCAA CAGCAGTCTG ACCCAGGCGC GCCGGAATCG CAGCCCGCTG
GGAGTCTGCA TCATCGATAT CGATCGTTTC AAAGGCGTCA ACGATACTTA CGGTTATGAG
TCGGGTGACG CCTTGCTTAA AACGGTCAGC CAACGTTTGA GCGATTGTAT GTCCCGGGAG
GATGTGCTTG CCCGTCTGGG CAGTGACGAA TTTGCGGCGG TGATTGCCAG TGTCGGATCG
CAGGATGAAT TTTCCGTGCT GGCGCAGAAA ATGCTCCATT GTCTGACCGA GCCGATTCAG
ATCGGCGAGC AAAAGCTTTA CTGCTCGGGT GGCATGGGCA TCGCTTTGTT CCCCGTGGAT
GGCGTGGATG CGGAGGCCCT GCTTAAAAAC GCGGCTACGG CCATGCATCA GGCCAAACAG
CATGGATCCA ACAACTTCCG TTTCTTTTCC AAGGGGATGA ACCGGATGGC ATGGGAGCGC
ATCGAGATCG AGACAGGCCT GCGCCGGGCC CTCGATCTCC AGCAGCTGGC CTTGCATTAT
CAGCCGCAGG TTGACCTGAA AACCGGACAT ATCATCGGTA TGGAAGCTCT GTTGCGCTGG
GAATCACCGG AACTTGGCCG GGTCAGCCCC ATGCGCTTTA TTCCTCTGGC CGAGGAAACC
GGGTTGATTC TGCCCATCGG CAACTGGGTA CTGGAGAGTG CCTGCAGGCA GGCCAAAGCC
TGGCATCGCG CCGGATTTCC TTCGCTGCGC ATGGCGGTGA ACATTTCCGC CCGTCAGTTC
AAACAGGCCG GTTTTATCGA TCGCCTGGAT GCGATCATCC AACGCAGCGG AATTAACCCC
GAGTTGCTGG AAATGGAACT GACCGAAAGT CTGATCATGG AAAAGTCCGA TGAAACCCTG
ATGACGCTTG TCGATATCAA ATCCCGGGGC ATCAAGCTTG CCATTGACGA TTTCGGAACA
GGTTACAGCA TGCTCAGCTA TCTCAAGCAT TTTCCCATTG ACCGGATCAA GGTCGATCGC
AGTTTCGTGC GCGATATCCC TGAGAATACC GATGACGCAG CGATCACCGA AGCCATCATC
GCCATGGCTC ACAGTCTCAA AATCGAGGTG ATCGCCGAAG GGATCGAAAC CCGGGAACAA
TTGGCTTTCT TAAAGGATCG CGCCTGCGAG GAAGGCCAGG GCTATTATTT CGGCCGCCCC
GTGCCAGTGG AGACCGCGGC GGAAATTCTG GCACAACAAT ACCCTCGCGG AGGCTCTTCC
TTGTTCGATT AG
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| Protein sequence | MTKPLNLLLA EDCEDDALLL IRALRHGGYR LTVERVETAE AMRAALATGK WDLIISDYSM
PRFSALAALE VARENGLDLP FIVLSGNIGE ETAVEAMRAG AHDYVMKGNL ARLLPAIERE
LREAEERRRR RRAELELRNS EKLFRSIFQN AVTGMATCSP DGRFLKVNPA LCEMLGYSEN
ELFGVSVLDI THPTDIELTE RLFAEAMGGQ TRSHDYEKRY IRRDGETLWA HVSTSWHYNE
DGTPSYSVAL ISNITPHHQA KQKIRQLAYF DGLTGLPNRQ LFLEHCNSSL TQARRNRSPL
GVCIIDIDRF KGVNDTYGYE SGDALLKTVS QRLSDCMSRE DVLARLGSDE FAAVIASVGS
QDEFSVLAQK MLHCLTEPIQ IGEQKLYCSG GMGIALFPVD GVDAEALLKN AATAMHQAKQ
HGSNNFRFFS KGMNRMAWER IEIETGLRRA LDLQQLALHY QPQVDLKTGH IIGMEALLRW
ESPELGRVSP MRFIPLAEET GLILPIGNWV LESACRQAKA WHRAGFPSLR MAVNISARQF
KQAGFIDRLD AIIQRSGINP ELLEMELTES LIMEKSDETL MTLVDIKSRG IKLAIDDFGT
GYSMLSYLKH FPIDRIKVDR SFVRDIPENT DDAAITEAII AMAHSLKIEV IAEGIETREQ
LAFLKDRACE EGQGYYFGRP VPVETAAEIL AQQYPRGGSS LFD
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