| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2536 |
|---|
| Symbol | cdd |
|---|
| ID | 3725238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2978383 |
|---|
| End bp | 2978793 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637752146 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_357944 |
|---|
| Protein GI | 77920129 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.289649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTC TCTCTGAGCC ACAACGCCGA CAGCTTGAAC AGGCAGCCCG CCAGGCGGCC
GAGAAAAGCT ACAGCCCCTA CAGTCGGTTT GCCGTAGGCG CCGCCTTGCT GGCCGCTGAC
GGCAGCATCG CTACCGGCTG CAACATCGAG AACGCCTCCT ACGGCCTGAC CCTGTGTGCC
GAGCGGGTAG CCATGGCCCG AGCCGTGGCC GACGGGCAGC GGCATTTTAT CGCCCTGCTC
CTGTTTACGG CGACAGCACA TCCGACCCCG CCTTGCGGCG CCTGCCTGCA GATGCTTGCG
GAATTTGCCC CGACATTGCA CATCACGGCG GTATGCGATA CCCATTTGAC CCTTGAAGGG
CCACTTCAGG ATTTCCTGCC CCATGCATTC GGAAAGCCGC CTTGCCCCTA A
|
|---|
| Protein sequence | MSPLSEPQRR QLEQAARQAA EKSYSPYSRF AVGAALLAAD GSIATGCNIE NASYGLTLCA
ERVAMARAVA DGQRHFIALL LFTATAHPTP PCGACLQMLA EFAPTLHITA VCDTHLTLEG
PLQDFLPHAF GKPPCP
|
|---|
| |