Gene Pcar_2527 details

Gene Information

• Locus tag: Pcar_2527
• Symbol: coxC
• ID: 3725229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2971385
• End bp: 2971990
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637752137
• Product: caa3-type cytochrome c oxidase, subunit III
• Protein accession: YP_357935
• Protein GI: 77920120
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.00772107
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACAT CGGCACAGCA TCACGATGCG GAAGGCGCAC GACTGGGCAT GTGGCTGTTC 
CTGCTCTCCG AGCTGCTGCT GTTCGGCGGA CTCTTCGTGC TTTTTGCCGT TTACCTGCAG 
CGCTATCCGG ACCAGTTTAT CGCCGGGGGC AAGCAGTTGA GTCTGGCTTT CGGCGCCGGC 
AATACCGCTC TGCTGCTGAC CAGCAGCCTG ACCGTGGCGC TGGCCCTCGA AGCCCTGCGC 
CGCAACCGCT ACCGTCTCTG CCAGTGGCTG CTGGGCAGTA CCATCGGCGC TGCGCTGTGG 
TTCCTGGTCA ACAAGGGGCT GGAATGGCAC GCCAAATTCG AGCACGATCT CTACCCCGGC 
TCGGTGACAT TGCGCCAGGC ACCGCCCGGC CATGACACCT TTTTCGGTCT GTACTACCTG 
ACCACCGGCC TGCACGGGCT GCACGTGATC ATCGGCGGCG TCATCCTGGC ATGGGTACTG 
TGCCTGGTGC GCCAGGGCCG CATAACCGGA ACATCCCCGA CCATCCTGGA GAACAGCGCC 
CTTTACTGGC ACCTGGTGGA TGTGATCTGG ATATTCATTT TTCCTCTGTA CTACCTGCTG 
CTGTAG 

 

Protein sequence

MNTSAQHHDA EGARLGMWLF LLSELLLFGG LFVLFAVYLQ RYPDQFIAGG KQLSLAFGAG 
NTALLLTSSL TVALALEALR RNRYRLCQWL LGSTIGAALW FLVNKGLEWH AKFEHDLYPG 
SVTLRQAPPG HDTFFGLYYL TTGLHGLHVI IGGVILAWVL CLVRQGRITG TSPTILENSA 
LYWHLVDVIW IFIFPLYYLL L