| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2526 |
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| Symbol | coxA |
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| ID | 3725228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2969757 |
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| End bp | 2971388 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637752136 |
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| Product | caa3-type cytochrome c oxidase, subunit I |
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| Protein accession | YP_357934 |
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| Protein GI | 116878615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000000123308 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAA TCATCCGCAT GGGAGAATAC TTCAGACGCG GTTTCCTCGA ACCTTCAGGC
GACCAACCCT CCTTGTTCGA TTGGATATTT TCCACCGACC ACAAACGTAT CGGCCTGCTC
TATCTCTACT CCATCAGTAC CTTTTTTGCC GTCGGCGTGA CTTTAGGTCT GCTGATTCGC
CTGGAACTGA TCGCTCCGGG TAGCACCATT GTCGGGCCCG ACACCTACAA TGCGCTGTTC
ACTCTGCACG GGGTGGTGAT GATCTTTCTG TTCATCATCC CTGGAATACC CGCCGCCTTC
GGCAACATCC TGCTGCCGTT GCAGATCGGC GCACGGGATG TGGCTTTTCC GCGGCTGAAT
CTGTTTTCCT GGTGGCTCTA CATCATCGGC GCCAGCATGG CCCTGTCCTC CCTGCTGGGA
GGCGGCGGCC CGCCGGACAC CGGCTGGACC TTTTATCTGC CTTTTGCCGG CGAGACCGCC
ACCAACGTGT CGCTGGCGGT ATTTGCCGTC TTTATTCTCG GCTTTTCCTC CATTCTGACC
GGCCTCAACT TTATCACCAC AATACATCGG ATGCGGGCCC CCGGCATGAC CTGGACACGC
CTGCCGCTGT TTATCTGGTC GCTGTACGCC ACCGCCTGGG TGCAGGTACT GGCCACACCG
ATACTCGGCA TCACCCTGCT GCTGATTCTG GCCGAGCGGA TTCTGGGCCT GGGGCTGTTC
GACGCCGCCC GCGGCGGCGA CCCGCTGATG TACCAGCACC TGTTCTGGAT TTACTCCCAT
CCTGCGGTCT ACATCATGGT GCTGCCGGCC ATGGGAGTGG TATCGGAAAT CATCCCGGTC
TTTGCGCGCC GACCGATTTT CGGTTACAAG GCCATCGTCG CCTCGAGTAT CGGTATCGCC
GCAGCGGGCT CCCTGGTGTG GGGACATCAC ATGTTCGTCA GCGGCATGAG CGACACCGCC
ATCCTGGTCT TTTCCCTGCT GACCTTCATC GTGGCGATCC CCTCGGCGGT CAAGGTGTTC
AATTGGGTGG CGACCCTCTA CGGCGGGTCG ATCCGCCTCG ACGCGCCGAT GCTTTTCGCC
CTGTCCTTCG TGCTGCTGTT TTCCATCGGA GGCCTGTCGG GGCTGGTGCT GGGCGCCGCG
GCCACCGATG TGCATGTCCA CGATACGCAT TTTGTGGTGG CGCATTTTCA TTACGTGATG
TTCGGTGGCA CCGGCTTCGC CTTTTTCGGC GCCCTGCACT ACTGGTTCCC GAAAATTTTC
GGGTGCATGT ACAATAACCG CCGGGCCACA TGGGGCTGGG GCATCATGAT CATCGGTTTC
AACCTGCTGT ACTTCTCCAT GATGCTGGCC GGCCTGCGAG GCATGCCGCG TCGCTACTAC
GACTACCTGC TTCAATTTTC CCAACTCAAT CGTCTGGCGA CCTACGGCTC GTGGATTCTG
GCAGTGGGCC TGATGCTCAT GGCCGCCAAC CTGTTGATTG CCCTGCGGCG CGGCCAATGC
GTCGGCGCCA ATCCCTGGGA GGCGGCAACC CTTGAGTGGA CCGTAGCATC GCCGCCGCCG
ACCGAAAATT TCGCGCAACT GCCACAGGTT AGCCATGGCC CGTACGACTT TAAAAAGGCG
GGGAAGCCAT GA
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| Protein sequence | MGKIIRMGEY FRRGFLEPSG DQPSLFDWIF STDHKRIGLL YLYSISTFFA VGVTLGLLIR
LELIAPGSTI VGPDTYNALF TLHGVVMIFL FIIPGIPAAF GNILLPLQIG ARDVAFPRLN
LFSWWLYIIG ASMALSSLLG GGGPPDTGWT FYLPFAGETA TNVSLAVFAV FILGFSSILT
GLNFITTIHR MRAPGMTWTR LPLFIWSLYA TAWVQVLATP ILGITLLLIL AERILGLGLF
DAARGGDPLM YQHLFWIYSH PAVYIMVLPA MGVVSEIIPV FARRPIFGYK AIVASSIGIA
AAGSLVWGHH MFVSGMSDTA ILVFSLLTFI VAIPSAVKVF NWVATLYGGS IRLDAPMLFA
LSFVLLFSIG GLSGLVLGAA ATDVHVHDTH FVVAHFHYVM FGGTGFAFFG ALHYWFPKIF
GCMYNNRRAT WGWGIMIIGF NLLYFSMMLA GLRGMPRRYY DYLLQFSQLN RLATYGSWIL
AVGLMLMAAN LLIALRRGQC VGANPWEAAT LEWTVASPPP TENFAQLPQV SHGPYDFKKA
GKP
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