Gene Pcar_2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2520 
Symbol 
ID3725222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2964859 
End bp2965902 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content62% 
IMG OID637752130 
Producthypothetical protein 
Protein accessionYP_357928 
Protein GI77920113 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.707016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTT GGCAACGACA ATTGATCGAT AGCGTGACCG CTCCCGCCGG TCTGGCGGAG 
CGATTCGGTA CGGATATGAG CGAGCTGGAT GCGGTGGTGC AACGCTATCC CATGCGGATT
ACCCCCTACT ATCTCGATCT CATTGAAAAA CCGGGGGATG CCATCTGGCG GCAGTGTGTA
CCCGACAGGC GCGAATTGCT CCCCTGTCAG GAAGATGCCG ATCCCCTTGC CGAGGAACGT
CTGTCGCCGG TGCCGCTGCT GGTGCACCGT TATCCCGATC GGGTGTTGCT GCTGGCCAGC
GGCCAGTGTG CGGTCTACTG CCGTTTCTGC ACCCGCAAAC GCAAGGTCGG TTGCGCCGCC
ATGGGGGTTA GCGATCGGCA TCTCGATGAG GCTATCGACT ATGTCGCGCG CACGGAGCAG
GTCCGCGACG TGATCCTGTC CGGCGGCGAT CCGCTGCTGC TGGAAGATGA CCGGCTCGAA
CATCTGCTCA TGCGCTTGCG CGCCATTCCC CACGTGGAGA TCATCCGTAT CGGCAGCCGA
GTGCCCGTTA CCCTGCCGCA GCGCATCACC GAAGAACTAT GCGCCATGCT GCGGCGCTAC
CATCCTCTGT ATCTCAATAC CCATTTCAAC CATCCGCGCG AGCTGACCCC GCAAGCTTTT
GAGGCCTGCC GACGACTGGC CGATGCCGGC CTGCCCCTGG GTAATCAGAC CGTGCTGCTG
CGCGGCGTCA ACGACACGCC TGCCGTGATG CGGCAATTGG TCAAAGGCCT GCTGAAAATG
CGCGTGCGCC CCTATTATCT GCACCATATG GATCTGGCGG CCGGTACGGG GCATTTCCGT
ACCCGCATCG AAACCGGCCT GGATATCGTC GCCGCCTTGC GCGGGCCGAT CTCCGGCCTG
GCCGTTCCCC ACTACGTCAT CGATTCCCCC GGCGGCAAAG GCAAAATTCC CCTGCTGCCG
GAGTATCTGG TGAAGCTTGG CGATACCGCC CTGCTGCGTA CGCCGTCCGG TGAAATGATC
GAATTTCCCA ATGGCGAGAT GTGA
 
Protein sequence
MSSWQRQLID SVTAPAGLAE RFGTDMSELD AVVQRYPMRI TPYYLDLIEK PGDAIWRQCV 
PDRRELLPCQ EDADPLAEER LSPVPLLVHR YPDRVLLLAS GQCAVYCRFC TRKRKVGCAA
MGVSDRHLDE AIDYVARTEQ VRDVILSGGD PLLLEDDRLE HLLMRLRAIP HVEIIRIGSR
VPVTLPQRIT EELCAMLRRY HPLYLNTHFN HPRELTPQAF EACRRLADAG LPLGNQTVLL
RGVNDTPAVM RQLVKGLLKM RVRPYYLHHM DLAAGTGHFR TRIETGLDIV AALRGPISGL
AVPHYVIDSP GGKGKIPLLP EYLVKLGDTA LLRTPSGEMI EFPNGEM