Gene Pcar_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2503 
Symbol 
ID3725205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2943274 
End bp2945265 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content58% 
IMG OID637752114 
Productpyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_357912 
Protein GI77920097 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGA TACTCTACGG AGTATGGAAT GAAGAGATCG CCGACAACCG GGACAAGCGG 
TTTTTCGAGA TAGAAGAGCT GAAAGAGTTC GATCAGATGG ATGAATTCGA TCCCGGAAAT
CCGGTGAAAG CGTTCCTGGG TGCCAACGGT TTTTTTGTCT TCGACAAGGA GACCAGCATT
CTTGACGCCG CACATCAGTA TGTCGCCACT GCAGCCAGGG AGTCCTGCGG CAAGTGTACG
CCCTGCCGTG TGGGCACCGA GGTGCTCACC TCAAAGCTGG AAGCGCTCAG CAAGGGCGAG
CTTGGAGCTG ATGCCGTGGA TGAGATTCTG ACTCTGGCCG AACATATCAA GTCCACTTCC
ATGTGCGGCC TGGGGCAGAC CGCCACCGAT CCCCTTATCG CCATGCTCCG GCATTTTCGG
GATGAATTCG AGGTCAATAT CGGCCGGTAC GATGAGACCG GAAGGCAGGC CTACACCGAA
TATGTGACCG CCCCATGCAT CGAGCAGTGC CCCTCCCGGG TAGATATCCC TCGCTACATC
GAGTATGTGA AAGACAGTAA ATTCGACCGT TCAATCGGCG TGATTCTGAA GAAATACCCC
ATGGCCGCCA CCTGCGGCCG CGTGTGTGTG CGCTTCTGCG AGGCCGCCTG CCGCCGCAGT
CGCGTGGACG AGCCCGTGGG TATCAAGGTG CTCAAGCGCT TCGTGGCCGA CAAGGAGCGC
TACATCAAGG ATCAGTGGTT CAACGAGGAC CTCATCCATG AAAAAAAGGG CGACGATCTG
AAAGTGGCCG TCATCGGCGC GGGCCCGGCC GGCATCTCTG CGGCCTACCA TCTGCTGCTC
AAGGGCTATC CCGTGGACGT GTACGAGTCC CTCACAGAAC CCGGCGGCAT GGCGGGTGTG
GGCATTCCCA AGTACCGCTT GCCCAAGGAG GAGATTCTCA ACAAAGAGGT CAGCATCATC
GAGTCGCTTG GCGGACATAT CCATTATGGC AAGAAGATGG GTAAGGATTT TTCCCTCGAC
GATCTGATCA AGCAGGGGTA CAAGTCGGTC TTCATCGGCG TGGGCGCCCA CAAGGGCAAG
AAGTTGAAAG TGGCCGGTGA AGACGATTCT CTGGAAGGCT ATATCAGCGG CGTCAAGTTC
TTACTCTATA TCAATCAGTT TGTCCTCAAT GAAGAGCAGA CCGAATTCCC GCTGAAGCTG
GGCAAGAAGC TGCTGGTGAT GGGCGGTGGC AATGTGGCCA TGGACTGCGC TCGCTCCGCC
CTGCGCATGG GCGTGGAAGA GGTGCATGTG GCCTACCGTC GCGCCGAAGA GCAGATGCCC
GCCGATGTGG AAGAGATCCA CGCGGCCAAG GAAGAGGGTA TTCGCTTCCA TTTCCTCAGT
CAGCCGGTTC GGGTGATTTC TGAAAAGGGA CAGGTCACCG GCATTGAATT CGTTGAGATG
GAGCTGGGCG AGGTGGACTC CAGCGGACGC CGGGGTGTGA CTCCCAAGCC GGGATCGGAA
TTCATCATCG ATACCGACAA CGCGGTGGTC GCCATCGGCC AGGAAGTGGA TACCTCCTTC
CTCGGCGAGG ATGACGGGAT GGAGCTCGAT CGTTGGGAAT GCCTGAAGAC CGACGACCAT
CTGGCCACCA CCCGCAAGGG TGTGTTCGCG GGCGGTGATT GCGTGCTGGG GCCAGCCACC
CTGATCCAGG CCATGGCCCA GGGCGAGATG GCGGCCCGAT CCATAGACGA GTACTTGACT
TACGGCCGCC CCCAGTTCGA TTCGGATAGC CGCATGAGCC AGTTCGTTAA ATGTGTCCGT
AAGCATGCCG ACGACGACGT GATTCAGCCC GTGAAGCATC AGTACCGGGT GCGCATTGAG
GAACTGGAGC CCGAGAAGCG GAAAGAGATC TTCGAGGAGG TTGAGAAGGT CATCACCGAG
GACGAGGCGT TTCGCGAGGC GGATCGGTGT CTGCGATGTT ATCGGATTTA TTCTGTGATA
ACGGATCATT AA
 
Protein sequence
MARILYGVWN EEIADNRDKR FFEIEELKEF DQMDEFDPGN PVKAFLGANG FFVFDKETSI 
LDAAHQYVAT AARESCGKCT PCRVGTEVLT SKLEALSKGE LGADAVDEIL TLAEHIKSTS
MCGLGQTATD PLIAMLRHFR DEFEVNIGRY DETGRQAYTE YVTAPCIEQC PSRVDIPRYI
EYVKDSKFDR SIGVILKKYP MAATCGRVCV RFCEAACRRS RVDEPVGIKV LKRFVADKER
YIKDQWFNED LIHEKKGDDL KVAVIGAGPA GISAAYHLLL KGYPVDVYES LTEPGGMAGV
GIPKYRLPKE EILNKEVSII ESLGGHIHYG KKMGKDFSLD DLIKQGYKSV FIGVGAHKGK
KLKVAGEDDS LEGYISGVKF LLYINQFVLN EEQTEFPLKL GKKLLVMGGG NVAMDCARSA
LRMGVEEVHV AYRRAEEQMP ADVEEIHAAK EEGIRFHFLS QPVRVISEKG QVTGIEFVEM
ELGEVDSSGR RGVTPKPGSE FIIDTDNAVV AIGQEVDTSF LGEDDGMELD RWECLKTDDH
LATTRKGVFA GGDCVLGPAT LIQAMAQGEM AARSIDEYLT YGRPQFDSDS RMSQFVKCVR
KHADDDVIQP VKHQYRVRIE ELEPEKRKEI FEEVEKVITE DEAFREADRC LRCYRIYSVI
TDH