Gene Pcar_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2499 
Symbol 
ID3725201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2937933 
End bp2939036 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content58% 
IMG OID637752110 
ProductGGDEF domain-containing protein 
Protein accessionYP_357908 
Protein GI77920093 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGGCCA CTTTGACCAA TCCCGAAACT CTGCTTAGCC TTGAAGAACG CATTCGAGAA 
CTCGAAATCG AAAACAAATC CCTCGCTGAA ACCTGTCACA ACCTTGCAAC CAGCCAGAAG
AAACTCGAAG AACTCGTCGC GGCTTCGACA AAAAAACAAC TGGCCATGGA AATGCAAAGC
ATGGAACTGG AGCAGATTTT TTCGTCCTCT TCCGACCCGA TCTGGGTCGT ACGCCAGGAC
GGAACCATCG TGCGTGCCAA CAGCGCCATG CTCCGACTTC TCAACAGGAC TCACGATGCC
GTGGTAGGAC ATGCCTGCCA TGATGTATTC GATTTCTGCT CCAGGGACAG TGCCCGCTGC
CCTCTGACCC AGGCCCATCT TCCCCAATCG TTTCATGAAT GGGATATCGA GTGCCCCAAC
GCCAAGGGCG AATCCGATTT CTATATGGTC TCCACTGCGT CCCTGGTAAC CCTCGATGGC
TCGCCCGGCA TCGTCGGACA TTTTCGGGAC ATCACCATAC GCAAGCGCGC GGAAGCGGCC
TTGGAGCAAG CCAATACCGC CCTCTCCCAT CTGGCGCGTG TCGACGCCCT GACCCAGATC
CCCAATCGAC GGGCATTCGA TGAGGCACTG CAGGCGGAAT GGGGGCGTTT GGCCCGCGAA
GAAGGTCCGT TGTCGCTGGT TCTGTGTGAC ATCGACTGTT TTAAAAAATA TAACGATCAC
TACGGCCACC AGGCTGGCGA CAAAGTTCTT CGTCGGGTTG CCGAGGCACT GGCGGATTGC
GCCCGGCGCC CCGCCGATCT TGCATCCCGC TACGGCGGCG AAGAGTTTGC CCTGCTGCTT
CCCCAGACCC CCCTGGAAGG CGCTTTGAGC GTTGCTGAAA AAGCACGCCA GGCCGTAGAG
GATCTGGCCT TGCAACACCC CACCTCCAGC GTAAAACCGA TCCTTACCCT CAGTCTGGGA
GTCGCCTCAG TCATCCCCTC GCTGCATATA GCCCCAACGA CCCTTATCGA ATCCGCCGAC
AAGGCTCTCT ACCAAGCCAA AAACGCCGAC CGCAATCGGG TAGTGCCCGC GGTATGCAGC
TCCCCAACCA GCCTTAACCT CTGA
 
Protein sequence
MEATLTNPET LLSLEERIRE LEIENKSLAE TCHNLATSQK KLEELVAAST KKQLAMEMQS 
MELEQIFSSS SDPIWVVRQD GTIVRANSAM LRLLNRTHDA VVGHACHDVF DFCSRDSARC
PLTQAHLPQS FHEWDIECPN AKGESDFYMV STASLVTLDG SPGIVGHFRD ITIRKRAEAA
LEQANTALSH LARVDALTQI PNRRAFDEAL QAEWGRLARE EGPLSLVLCD IDCFKKYNDH
YGHQAGDKVL RRVAEALADC ARRPADLASR YGGEEFALLL PQTPLEGALS VAEKARQAVE
DLALQHPTSS VKPILTLSLG VASVIPSLHI APTTLIESAD KALYQAKNAD RNRVVPAVCS
SPTSLNL