Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2499 |
Symbol | |
ID | 3725201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2937933 |
End bp | 2939036 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637752110 |
Product | GGDEF domain-containing protein |
Protein accession | YP_357908 |
Protein GI | 77920093 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGGCCA CTTTGACCAA TCCCGAAACT CTGCTTAGCC TTGAAGAACG CATTCGAGAA CTCGAAATCG AAAACAAATC CCTCGCTGAA ACCTGTCACA ACCTTGCAAC CAGCCAGAAG AAACTCGAAG AACTCGTCGC GGCTTCGACA AAAAAACAAC TGGCCATGGA AATGCAAAGC ATGGAACTGG AGCAGATTTT TTCGTCCTCT TCCGACCCGA TCTGGGTCGT ACGCCAGGAC GGAACCATCG TGCGTGCCAA CAGCGCCATG CTCCGACTTC TCAACAGGAC TCACGATGCC GTGGTAGGAC ATGCCTGCCA TGATGTATTC GATTTCTGCT CCAGGGACAG TGCCCGCTGC CCTCTGACCC AGGCCCATCT TCCCCAATCG TTTCATGAAT GGGATATCGA GTGCCCCAAC GCCAAGGGCG AATCCGATTT CTATATGGTC TCCACTGCGT CCCTGGTAAC CCTCGATGGC TCGCCCGGCA TCGTCGGACA TTTTCGGGAC ATCACCATAC GCAAGCGCGC GGAAGCGGCC TTGGAGCAAG CCAATACCGC CCTCTCCCAT CTGGCGCGTG TCGACGCCCT GACCCAGATC CCCAATCGAC GGGCATTCGA TGAGGCACTG CAGGCGGAAT GGGGGCGTTT GGCCCGCGAA GAAGGTCCGT TGTCGCTGGT TCTGTGTGAC ATCGACTGTT TTAAAAAATA TAACGATCAC TACGGCCACC AGGCTGGCGA CAAAGTTCTT CGTCGGGTTG CCGAGGCACT GGCGGATTGC GCCCGGCGCC CCGCCGATCT TGCATCCCGC TACGGCGGCG AAGAGTTTGC CCTGCTGCTT CCCCAGACCC CCCTGGAAGG CGCTTTGAGC GTTGCTGAAA AAGCACGCCA GGCCGTAGAG GATCTGGCCT TGCAACACCC CACCTCCAGC GTAAAACCGA TCCTTACCCT CAGTCTGGGA GTCGCCTCAG TCATCCCCTC GCTGCATATA GCCCCAACGA CCCTTATCGA ATCCGCCGAC AAGGCTCTCT ACCAAGCCAA AAACGCCGAC CGCAATCGGG TAGTGCCCGC GGTATGCAGC TCCCCAACCA GCCTTAACCT CTGA
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Protein sequence | MEATLTNPET LLSLEERIRE LEIENKSLAE TCHNLATSQK KLEELVAAST KKQLAMEMQS MELEQIFSSS SDPIWVVRQD GTIVRANSAM LRLLNRTHDA VVGHACHDVF DFCSRDSARC PLTQAHLPQS FHEWDIECPN AKGESDFYMV STASLVTLDG SPGIVGHFRD ITIRKRAEAA LEQANTALSH LARVDALTQI PNRRAFDEAL QAEWGRLARE EGPLSLVLCD IDCFKKYNDH YGHQAGDKVL RRVAEALADC ARRPADLASR YGGEEFALLL PQTPLEGALS VAEKARQAVE DLALQHPTSS VKPILTLSLG VASVIPSLHI APTTLIESAD KALYQAKNAD RNRVVPAVCS SPTSLNL
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