| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2474 |
|---|
| Symbol | |
|---|
| ID | 3725176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2915593 |
|---|
| End bp | 2916936 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637752085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_357883 |
|---|
| Protein GI | 77920068 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3287] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGGA AAATACGGCA GATGATCGAC AGCATCATCG CCCAGACGGC AACGAACAAT
CCCGTACTGG AACGTGTAAT CAAAACCAAG ATGATTCTCA AAGGAATCAA CCCGGCTAAA
TTCACCGCCG AGTCGGATGA CGACCCCGCC ATTATCGCCA AACTTGAAAA CATGAAGCAG
GCATTCACAG GCACCGGCGG CAAAAACACC CCCGCAGCAC GGCAACGCTC CGGCGCGGGA
AAAATCAAGA CAGCCTTCTC CAGCAAAACC ACAACGGCCG ATTGCGTCAG GGAAATCCAA
AGCCAGATCG CAGACCTGGA TCCGTCCGCT GTCATTTTTT TCGCGTCCAC CGTCCATGCT
CCCGAGGCCA TAAGCCGCCA GATGCAGGAC GCCTTTCCCA AGGCGCAGGT TTTCGGGTGT
TCTTCGGCGG GGGAAATCAC CAGCGGAGCC ATGCTCAACG ACTCTGTCGT CGCCATGGCT
TTTTCTGCCG AGATGGCACC GGATCTTAAA CTCGAGGTTA TCCGGAACCT CGGGCAACGC
CACGGCATCG AACAGGCATT CGGGAATTTT GAAAAACACT TCGGGCAACC GGTGGCCGCC
ATGGATCCGA CCCGCTATGT GGGCCTGCTG TTGATCGATG GCCTGGCCGG GGTGGAAGAG
AAGGTGACGG AAACCCTCGG CGATTTGACC AACGTGCCTT TTATCGGAGG ATCCGCCGGG
GACGATCTGC AGTTCACCGG CACCTATGTT TATGCCAACG GCAACTGTTA CCGGAATGCC
GCCCTGCTTG CCCTGCTGAA ACCGGGGGTT CGTTTTTCGT TCATAAAAAC GCAAAGCTTC
CGCCTTCTGG GCAAAACCCT CAAGGTCACC CGGGCCAACG AAGCCAACCG GGAAGTCATT
GCGTTTAACG GCAAACCCGC AGCCCAGGCC TATGCCGAAG CCATCGGGGT GCCGACCCCA
GAAGTCAGCC GCCGGTTTAT GCGCAACCCC ATCGGCCTTA TTGTCGACGG CGAGCCTTAT
GTCCGCAGCC CGCAAAGGCT GAAGGGCGAC ACCATGGCGT TTTACTGCAG CGTCAAAGAG
GGCATGAAGC TCTCCCTCCT GGAGTCAACC GACATGCTTA GCGACACTCG TGACGCCATT
TCCCGGGCCG AGAAAACAAT GGGGCGCATA TCCGGGATAC TCGATTTCGA CTGCATTTTG
CGAACACTCG ACCTGCGGCA GAAAAACCTT TCCACCGAAT ACGGCAGGAT TTTTACCGAT
ATTCCAACCG TCGGATTCAG TACCTATGGC GAACAGTACA TAGGGCATAT CAATCAAACA
GCAACCATGC TGGTCTTCGG CTGA
|
|---|
| Protein sequence | MAGKIRQMID SIIAQTATNN PVLERVIKTK MILKGINPAK FTAESDDDPA IIAKLENMKQ
AFTGTGGKNT PAARQRSGAG KIKTAFSSKT TTADCVREIQ SQIADLDPSA VIFFASTVHA
PEAISRQMQD AFPKAQVFGC SSAGEITSGA MLNDSVVAMA FSAEMAPDLK LEVIRNLGQR
HGIEQAFGNF EKHFGQPVAA MDPTRYVGLL LIDGLAGVEE KVTETLGDLT NVPFIGGSAG
DDLQFTGTYV YANGNCYRNA ALLALLKPGV RFSFIKTQSF RLLGKTLKVT RANEANREVI
AFNGKPAAQA YAEAIGVPTP EVSRRFMRNP IGLIVDGEPY VRSPQRLKGD TMAFYCSVKE
GMKLSLLEST DMLSDTRDAI SRAEKTMGRI SGILDFDCIL RTLDLRQKNL STEYGRIFTD
IPTVGFSTYG EQYIGHINQT ATMLVFG
|
|---|
| |