| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2470 |
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| Symbol | hrpB |
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| ID | 3725172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2909433 |
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| End bp | 2911967 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637752081 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_357879 |
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| Protein GI | 77920064 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.590615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCGA ATTACGGAAA ATTCCCCATC GATAGTATCC TTGGCGATGT TGCGCTGGCT
TTGCGATCGA ACCAGGCCGC CGTCTTGCAG GCCGAACCGG GGGCCGGCAA AACCACACGT
GTTCCTCTGG CATTGTTGGA TGAGCCCTGG TTGGCCGGCC AGCGTATTCT CATGCTCGAA
CCGCGTCGGC TGGCAGCGAC CAATGCCGCG CGTTATATGG CCGGTTGCCT GGGGGAACAG
GTCGGCGCGA CCGTCGGTTA TGCCATTCGC TTTGATCGAC GAACTTCGGC GGCGACCCGT
CTGGAGGTGG TCACCGAAGG CATCCTGACC CGGCGCTTGC AGGCCGATCC GACTCTTGAG
GGGGTCGGTC TGGTGATTTT TGACGAGTTT CACGAACGCA ATCTGAATTC CGACCTGGCC
CTGGCCCTGT GCCGGGATGC GCAGCTGGGG TTGCGCGAAG ATCTCAAGCT GCTGGTCATG
TCGGCCACTC TTGATGGCGA ACCGGTGGCG CGTCTGTTGG GGGATGCACC GTTGCTGCGC
TGTCCCGGTC GCTGCCATCC TGTGGAGGTG ACCTACCTGC CCCGAGAACC TCAAGGGCCG
CTGGCCGAAG TGGTCGCACG GGCCGTGCGG CGGGCGGCTC GCGAAACCGA AGGCGATATG
CTGGTGTTTT TGCCCGGTGC CGGGGAAATC CTTCGCTGCC GCGATCTGCT GTTGCGGGAA
CCGGTTGTCG ACGATCCGCA GATCAACGTT TTGTATGGCG ATTTGCCTTT TGCGGAGCAG
GAACGCGCTT TGCGCCCCGG GCCACGGCGC AAGGTGGTGT TGGCGACCAA TATTGCCGAA
ACCAGTCTGA CCATCGAGGG GGTGCGGGTG GTTATCGACA GCGGTTTTAT GCGACAGTCC
CGATTCGATG CAGGCTCCGG TCTGCCGCGC CTGGTTTCGG TGCGGATTAC CGCCGCCAAT
GCCGATCAGC GCGCCGGGCG CGCCGGGCGT CTGGGGCCCG GTCGCTGTTA TCGACTCTGG
ACCGAAGCTA CCCATGGCGG TTTGCTGCCT TTTGCCGCAC CGGAAATACG CAGCGCCGAC
CTGACCCTCC TGGCTCTTGA ACTGGCCCGC TGGGGGGTGC CGGATGCCAT GTCTCTGTGC
TGGCTCGATG CGCCGCCCGC CGGTGCTTTG AGCGCAGCGC GGGCATTGCT CCGGCAGTTG
GGGGCTCTGG ACGCCCGGCA GCGCCTGACC CGTTTGGGGC AGGCGATGGC CGAGCTGCCG
GCTCATCCCC GCATCGCCGC TCTTCTGGTG GCCGGTCGTG GCAACCCCCT GGCACCGTGG
GCCTGCGATC TGGCGGCTTT GCTGGAAGAG CGGGATCTGT TACGGGGCAA CCGCCGCGCA
TCCCATGCCA CGGACAGCGA TCTGCTGGAA CGTCTCGATA TTTTGCAGGC CTGGCGAACC
AAAGCGTCCT TGCCCGAGGG GGTGGATGCC TCCGCCTGTC GAACCGTGGA TCGCGCGGCG
CGTGCCTGGC GGCGACGTTC GCGTCTGGAG CAAGGGGCAC AGACAGCCAT GCCCGATGCC
GACTCCATCG GTGGACTGTT GCTGGCCGCT TATCCCGACC GGCTGGCACG GCAGCGCGAG
GTCGGGTCAA AACGCTATGT GCTGGCCAAT GGTCAGGGAG GCTGCCTGTC GCCGCGCAGC
GGCTTGCGCG GGACGGAATA TCTGGTTGCG GTACATGTCA GCGGGGGGCG CACCGGGGAT
GCCTTTATTC ACCAGGCCAG TTCCGTGGGC CTTGCCTCGA TCGAGTCGTT CTATGCTGAG
CGTCTTGGCT GGCAGCGCCG GGTTTTCTGG GATGCCGCCC AGCAGCGTAT CGTGGCCCGG
GAGGAGCGTA GCCTCGGAGC CTTGTTGCTG GCCAGCCGGC CGGTTGAAGC GAGCGGCGAT
GAAATGCACC AGGCCCTGCT GGAAGGTATC CGCCAGCTTG GCCTGGATGC CCTGCCCTGG
GAGGACGAAG CGCGCCAGTT GCAGTATCGC GTAGCTGTGA TGGCGGAGGC TTACGCTGAG
CAGTCATGGC CGGATCTGTC CGATGACGCC TTGCGGGAAA GCCTTGCGGA ATGGTTGTCG
CCCTTTGTGG CGGGCATGCG CCGCGCGGCC GATCTGAAGC GCCTCGATCT GGTGGAGGTG
TTGCGCAGTC GCCTTGACTG GTCGCACCTC CGTCTCCTGG ATACGGAGGT GCCAACCCAT
CTCGCTGTCC CCAGCGGTCA TCGGGTGCGA TTGACTTACC AGCAAAACGG GCCACCGATA
CTGGCGGTTA AACTGCAGGA ACTCTTCGGC CTGGCCGATA CGCCCAGCGT GGCCGGCGGG
AGGGTCGCCG TGCAGTTGCA CCTGTTGTCT CCCGCGCGCA GGCCCCTTGC CGTAACCCAG
GACCTGCGCC ATTTCTGGGA CCATGTGTAT CCCGAGGTGC GCCGGGAAAT GGCCGGGCGT
TATCCCAAAC ATCCCTGGCC CGACGATCCA TGGCGGGCGA TCCCGACACG CTCCACAAAA
CGAAAAAAGC CCTGA
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| Protein sequence | MISNYGKFPI DSILGDVALA LRSNQAAVLQ AEPGAGKTTR VPLALLDEPW LAGQRILMLE
PRRLAATNAA RYMAGCLGEQ VGATVGYAIR FDRRTSAATR LEVVTEGILT RRLQADPTLE
GVGLVIFDEF HERNLNSDLA LALCRDAQLG LREDLKLLVM SATLDGEPVA RLLGDAPLLR
CPGRCHPVEV TYLPREPQGP LAEVVARAVR RAARETEGDM LVFLPGAGEI LRCRDLLLRE
PVVDDPQINV LYGDLPFAEQ ERALRPGPRR KVVLATNIAE TSLTIEGVRV VIDSGFMRQS
RFDAGSGLPR LVSVRITAAN ADQRAGRAGR LGPGRCYRLW TEATHGGLLP FAAPEIRSAD
LTLLALELAR WGVPDAMSLC WLDAPPAGAL SAARALLRQL GALDARQRLT RLGQAMAELP
AHPRIAALLV AGRGNPLAPW ACDLAALLEE RDLLRGNRRA SHATDSDLLE RLDILQAWRT
KASLPEGVDA SACRTVDRAA RAWRRRSRLE QGAQTAMPDA DSIGGLLLAA YPDRLARQRE
VGSKRYVLAN GQGGCLSPRS GLRGTEYLVA VHVSGGRTGD AFIHQASSVG LASIESFYAE
RLGWQRRVFW DAAQQRIVAR EERSLGALLL ASRPVEASGD EMHQALLEGI RQLGLDALPW
EDEARQLQYR VAVMAEAYAE QSWPDLSDDA LRESLAEWLS PFVAGMRRAA DLKRLDLVEV
LRSRLDWSHL RLLDTEVPTH LAVPSGHRVR LTYQQNGPPI LAVKLQELFG LADTPSVAGG
RVAVQLHLLS PARRPLAVTQ DLRHFWDHVY PEVRREMAGR YPKHPWPDDP WRAIPTRSTK
RKKP
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