Gene Pcar_2469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2469 
Symbol 
ID3725171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2908576 
End bp2909385 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content58% 
IMG OID637752080 
Productputative transport protein 
Protein accessionYP_357878 
Protein GI77920063 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA TTAAACCATG GCTGACCGTC TATGGACTCA ACCTGTTGGG TGCTGTCCTG 
ATCCTGGCCA TCGGACTGTG GCTCAGCAAA CTGATTTCAA AACTGGTACG CAGGCTGATG
AAAGCCCGCG CCCTCGATCC GACCCTGATC GCCTTCTGCG GCAATCTGAT CTACGCGTCC
CTGGTGACGT TTGTCATCAT CGCCGCCTTG AGCAAGCTGG GCGTGCAAAC CGCCTCGCTG
ATCGCCGTAT TGGGTGCCGC CGGTCTGGCC GTCGGCTTGT CTTTGCAGAG TTCGCTGTCC
AATTTCGCCG CCGGCATCAT GATGATCGTC CTGCGGCCCT TCAAGGCCGG CGATTTCATC
GAAGGCGGCG GTATAGCCGG CACCGTGGAA CTGATCCACA TCTTCAGCAC ACGACTGAAA
ACGCCCGATA ACCGCACCGT CATCGTTCCC AATGCCAAGT TGCTCGGCGA CAATATCATT
AACTATACCG AACGGGGCAC GCGGCGCATG GATCTGGTCA TCGGCGTCAG CTACGAAGAC
GACATCCGGC AGGTCAAACA GACCCTGCTG GATATCATCG CCGAGGACAA ACGCTTCCTG
ACCGACCCGG CGCCGGTGGT CGCCTTGCAC GAATTCGCCG ACAGCAGTCT CAACTTTGTC
ATGCGGCCCT GGATCAGCGT GAAAAACTAC TGGCCGACCT ATTTCGACAC CATGGAAAAG
ATCAAGCTGC GTTTCGATGA AGCCGGCATC TGCATCCCCT TTCCGCAGCG GGACGTGCAT
CTCGTCCCGG CACCGGAAAA TGCCGACTGA
 
Protein sequence
MNQIKPWLTV YGLNLLGAVL ILAIGLWLSK LISKLVRRLM KARALDPTLI AFCGNLIYAS 
LVTFVIIAAL SKLGVQTASL IAVLGAAGLA VGLSLQSSLS NFAAGIMMIV LRPFKAGDFI
EGGGIAGTVE LIHIFSTRLK TPDNRTVIVP NAKLLGDNII NYTERGTRRM DLVIGVSYED
DIRQVKQTLL DIIAEDKRFL TDPAPVVALH EFADSSLNFV MRPWISVKNY WPTYFDTMEK
IKLRFDEAGI CIPFPQRDVH LVPAPENAD