| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2451 |
|---|
| Symbol | |
|---|
| ID | 3725153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2886749 |
|---|
| End bp | 2887891 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637752062 |
|---|
| Product | small-conductance mechanosensitive channel |
|---|
| Protein accession | YP_357860 |
|---|
| Protein GI | 77920045 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACT TTCTGGCGAC ACTGGATGCC ATTTTCCACG AAACCTTTCT CGGTATCAGC
GCCGGGCGAT TTGCCGCAGC CTTCGGCATC GTGATCGCCG CCCTGATCCT GAAAAAGGTT
TTCGGCCATA TCTTTGTCAA TGTCATCTTC CCCTTGGCTA CACGTACCAA GAGCCGCTAT
GACGACGAAT TTCTTAATTG TATCCGTAAA CCGTCCGAAT TTCTGGTGGT CATCATCGGT
CTTTTCATCG CCGTGCAGGT ATTGCAGCTG CCGACCACGC CGGTCGATAC CCGTCGCGGT
GCCCATGCCG TCCTCAAGGT ATTGGTAACC TTCGATATCG GCTGGGCCCT GTTTAACCTG
GTCAGCCTGC TCGACATTTT TTTATCCTCC TGGGTCGCCA AAACCGAATC GACCCTCGAT
GATCACCTGC TGCCCTTCAT CCGCAAGAGT CTGCGGGCGT TCATCATCTT CCTGGCGGCG
ATCATGACCA TTCAGAACCT CGGCTATTCC ATCTCCGGGC TGCTGGCGTC CCTGGGGATC
GGCGGTCTGG CCGTAGCTTT GGCGGCCAAG GACACCCTGT CCAATATTTT CGGCTCGTTC
ATGATCATTC TCGACCGGCC GTTTCTTATC GGCGACTGGG TCAAGGCCGG GGATATGGAG
GGGGTGGTCG AAGAGGTCGG TTTTCGTTCG ACCAAGATCC GCACATTTGC CAAGACCCTT
ATCACCGTCC CCAACAACAT TATCGCCAAT CTGTCCATCG ACAATTTCAG CCGCATGCCC
AAACGACGTA TCAAGCTTAA TGTCGGGGTC ACTTACGAAA CAAGCCCGGC ACAAATGCGC
CGGGCCGTCT CCATGATCCG TGAAATGTTG ACTGCACATC CCGCAATCCA GCAGGATTTT
TTCCTGGTCA ATTTTACCGA TTTCGGCGCC TCGTCCCTCG ACATCATGGT CTACTGCTTT
ACCACCACGA CCGTTTGGGG CGAATACCTC GATGCACGTG AAGATGTCTG CCTGAAGATC
ATGGATATTC TGGAAAGCCT CGATCTCGAA ATCGCCTTTC CCAGTCGCTC GATCTACCTG
CGTGAAACAC AAGACGATGA GAACGGAGCC GCAGCGTTGC AGACACCGAC GGCACCGGTT
TGA
|
|---|
| Protein sequence | MSDFLATLDA IFHETFLGIS AGRFAAAFGI VIAALILKKV FGHIFVNVIF PLATRTKSRY
DDEFLNCIRK PSEFLVVIIG LFIAVQVLQL PTTPVDTRRG AHAVLKVLVT FDIGWALFNL
VSLLDIFLSS WVAKTESTLD DHLLPFIRKS LRAFIIFLAA IMTIQNLGYS ISGLLASLGI
GGLAVALAAK DTLSNIFGSF MIILDRPFLI GDWVKAGDME GVVEEVGFRS TKIRTFAKTL
ITVPNNIIAN LSIDNFSRMP KRRIKLNVGV TYETSPAQMR RAVSMIREML TAHPAIQQDF
FLVNFTDFGA SSLDIMVYCF TTTTVWGEYL DAREDVCLKI MDILESLDLE IAFPSRSIYL
RETQDDENGA AALQTPTAPV
|
|---|
| |