Gene Pcar_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2428 
Symbol 
ID3725130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand+ 
Start bp2860255 
End bp2860923 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID637752039 
ProductATPase 
Protein accessionYP_357837 
Protein GI77920022 
COG category[R] General function prediction only 
COG ID[COG2102] Predicted ATPases of PP-loop superfamily 
TIGRFAM ID[TIGR00290] MJ0570-related uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones101 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AAACGCTCCT GTCCTGGAGC AGCGGAAAAG ACTGTGCCTA CGCCCTATAC 
AAGCTCCAAC AGAATCCGGA AGTCGATCTG GCGGGCCTGT TTTGCACGGT GAACAAGGAA 
TTCGACCGGG TGGCCATGCA TGGAGTCAGA CTGGAGCTTT TAAAGGAGCA GGCACGCAAT 
ATCGGACTGC CGCTGGAGAT CATCGAGATT CCTTATCCCT GCAGCAATGC CGACTACGAA 
ACCATCATGA AGCAATTCGT TGAGCGCGCT CGAAATAACC AAATCACGGA TTTTGCATTC 
GGCGATCTGT TTCTTGAGGA TATTCGCAGC TATCGAGAAG AAAAGTTGAA AGATTCCGGC 
ATCGAAGCCT CTTTTCCCAT TTGGGGTATA CCGACGGATG AGCTGGCCAG AGCGATCATC 
GCCAGCGGCA TCAAGGCCGT CATTACCTGC GTCGATCCCA AGCAAATTTC AAAAGATTTT 
GTCGGCAGAG AATTTGACGA CCGCTTCCTG GCCGCCCTGC CGGCGACCGT AGACCCCTGC 
GGCGAAAATG GGGAATTTCA TAGTTTTGTT TTCGACGACC CCATGTTCAA AAGGCCTGTA 
GACATTGTCA TGGGCGATAC CAGCGATCAT GAAGGCTTCG CATTTGCGGA TGTTTTGCCC 
GCTCCCTGA
 
Protein sequence
MKRKTLLSWS SGKDCAYALY KLQQNPEVDL AGLFCTVNKE FDRVAMHGVR LELLKEQARN 
IGLPLEIIEI PYPCSNADYE TIMKQFVERA RNNQITDFAF GDLFLEDIRS YREEKLKDSG 
IEASFPIWGI PTDELARAII ASGIKAVITC VDPKQISKDF VGREFDDRFL AALPATVDPC 
GENGEFHSFV FDDPMFKRPV DIVMGDTSDH EGFAFADVLP AP