Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2421 |
Symbol | dapA |
ID | 3725123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2848675 |
End bp | 2849556 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637752032 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_357830 |
Protein GI | 77920015 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00000015991 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTACAG GATCCATGGT CGCTATCATC ACGCCTTTCG ACCGCGAAGG GCGCTTCGAT GAAGAGACCT TCAGAAAACT TATCGATTTC CAGATCGAAA ACGGGACCGA CGTTATCGTT CCCTGTGGCA CCACCGGCGA ATCCGCCACG CTCGACCATG CCGAGCACAA AAAGGTCATC AAAACCTGCA TCGAGCAGGT CAATAAACGC GTACCGGTCC TGGCCGGCAC AGGCTCCAAC GCCACCAGCG AAGCCATAGA GTTAACCCGG GATGCCAAAA AGATGGGGGC CGACGGGGCA TTGCTGATTT CGCCCTATTA CAACAAGCCT TCCCAGGAAG GGGTCTATCG GCATTTCAAA GCTATCGCCG ACAATGTCGC CCTGCCCCAG GTACTGTATA ATGTCCCGGG CCGCACCGGC ATGAATATGA CCGCCGCGAC CACCATCCGT CTTGCCAGCC ACCCCAACGT GGTCGGCATC AAGGAAGCTT CCGGCGATCT GACCCAGGCC AGCACTATCA TCGCTGAAGC CGGCGATCAG ATTAACGTCA TCTCCGGCGA TGATTTCCTG ACCCTGCCGA TGATGGCATG CGGAGGCAAA GGCGTCATCT CGGTGACCGC CAACATCCTG CCGGGCGAAG TCAAAGCCAT GGTTACCGCC GTCAATGAAA ACCGTTATGC AGATGCGAAG AAGATCCACC TGAATCTGCT CAATCTGCAC CAGGCGATGT TCATCGAAAC CAATCCGGTA CCGGTAAAAG TCGCCGCGGC ACTGATGGGG CTCTGTGGAG ACCACCTGCG CCTGCCGCTG GTCGAGCTGC TGCCTGAAAA TCTCGCCAGC CTTAAAAAAG TACTGTCGGG TTATGGCCTG ATCCAGGCCT GA
|
Protein sequence | MFTGSMVAII TPFDREGRFD EETFRKLIDF QIENGTDVIV PCGTTGESAT LDHAEHKKVI KTCIEQVNKR VPVLAGTGSN ATSEAIELTR DAKKMGADGA LLISPYYNKP SQEGVYRHFK AIADNVALPQ VLYNVPGRTG MNMTAATTIR LASHPNVVGI KEASGDLTQA STIIAEAGDQ INVISGDDFL TLPMMACGGK GVISVTANIL PGEVKAMVTA VNENRYADAK KIHLNLLNLH QAMFIETNPV PVKVAAALMG LCGDHLRLPL VELLPENLAS LKKVLSGYGL IQA
|
| |