Gene Pcar_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2421 
SymboldapA 
ID3725123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2848675 
End bp2849556 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content57% 
IMG OID637752032 
Productdihydrodipicolinate synthase 
Protein accessionYP_357830 
Protein GI77920015 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000015991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAG GATCCATGGT CGCTATCATC ACGCCTTTCG ACCGCGAAGG GCGCTTCGAT 
GAAGAGACCT TCAGAAAACT TATCGATTTC CAGATCGAAA ACGGGACCGA CGTTATCGTT
CCCTGTGGCA CCACCGGCGA ATCCGCCACG CTCGACCATG CCGAGCACAA AAAGGTCATC
AAAACCTGCA TCGAGCAGGT CAATAAACGC GTACCGGTCC TGGCCGGCAC AGGCTCCAAC
GCCACCAGCG AAGCCATAGA GTTAACCCGG GATGCCAAAA AGATGGGGGC CGACGGGGCA
TTGCTGATTT CGCCCTATTA CAACAAGCCT TCCCAGGAAG GGGTCTATCG GCATTTCAAA
GCTATCGCCG ACAATGTCGC CCTGCCCCAG GTACTGTATA ATGTCCCGGG CCGCACCGGC
ATGAATATGA CCGCCGCGAC CACCATCCGT CTTGCCAGCC ACCCCAACGT GGTCGGCATC
AAGGAAGCTT CCGGCGATCT GACCCAGGCC AGCACTATCA TCGCTGAAGC CGGCGATCAG
ATTAACGTCA TCTCCGGCGA TGATTTCCTG ACCCTGCCGA TGATGGCATG CGGAGGCAAA
GGCGTCATCT CGGTGACCGC CAACATCCTG CCGGGCGAAG TCAAAGCCAT GGTTACCGCC
GTCAATGAAA ACCGTTATGC AGATGCGAAG AAGATCCACC TGAATCTGCT CAATCTGCAC
CAGGCGATGT TCATCGAAAC CAATCCGGTA CCGGTAAAAG TCGCCGCGGC ACTGATGGGG
CTCTGTGGAG ACCACCTGCG CCTGCCGCTG GTCGAGCTGC TGCCTGAAAA TCTCGCCAGC
CTTAAAAAAG TACTGTCGGG TTATGGCCTG ATCCAGGCCT GA
 
Protein sequence
MFTGSMVAII TPFDREGRFD EETFRKLIDF QIENGTDVIV PCGTTGESAT LDHAEHKKVI 
KTCIEQVNKR VPVLAGTGSN ATSEAIELTR DAKKMGADGA LLISPYYNKP SQEGVYRHFK
AIADNVALPQ VLYNVPGRTG MNMTAATTIR LASHPNVVGI KEASGDLTQA STIIAEAGDQ
INVISGDDFL TLPMMACGGK GVISVTANIL PGEVKAMVTA VNENRYADAK KIHLNLLNLH
QAMFIETNPV PVKVAAALMG LCGDHLRLPL VELLPENLAS LKKVLSGYGL IQA