Gene Pcar_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_2411 
SymbolhslV 
ID3725113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2837585 
End bp2838118 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID637752022 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_357820 
Protein GI77920005 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0141789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTC GCGGAACCAC CATCATTTGC GTACGCCACC AGGGACAGGT CACCATGGCC 
GGTGACGGCC AGGTCACGCT GGGCAACACG GTCATGAAAC ATGGCGCCCG CAAAATCCGT
CGCATGTACG AGGGTCGCAT CCTGGCGGGT TTTGCCGGAT CCACCGCCGA CGCCTTTACC
CTGTTCGAAA AGTTCGAAGC CAAGGTTCAG GAATTTCACG GCAATCTGCC CAAGGCCGCC
GTGGCCCTGG CCAAGGATTG GCGGACCGAC CAGATTCTGC GCAAACTCGA GGCGCTGCTT
ATCGTGGCCG ATACCAACAC CACCCTGGTG CTGTCCGGCG CCGGCGATGT GATCGAACCG
GATGACGGTA TCGCCGCCAT CGGCTCGGGC GGATCCTACG CACTGGCCGC GGCCCGGGCC
CTGACCCGGC ACGCCGGGTT GCCGTCGGAG CAGATTGCGA CCGAAGCGTT ACGCATTGCC
GGAGAGATCT GCATCTACAC CAACGACCAT ATCTCGTCGG AGAGTCTGCC GTGA
 
Protein sequence
MDIRGTTIIC VRHQGQVTMA GDGQVTLGNT VMKHGARKIR RMYEGRILAG FAGSTADAFT 
LFEKFEAKVQ EFHGNLPKAA VALAKDWRTD QILRKLEALL IVADTNTTLV LSGAGDVIEP
DDGIAAIGSG GSYALAAARA LTRHAGLPSE QIATEALRIA GEICIYTNDH ISSESLP