| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2408 |
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| Symbol | alaS |
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| ID | 3725110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 2832757 |
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| End bp | 2835405 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637752019 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_357817 |
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| Protein GI | 116878605 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00604857 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCA ACGAAATACG ATCCCGTTTT TTGAAGTTTT TCCAGGACCA TGGACACACG
GTAGTCCCCT CTTCGGCGTT GATCCCGCAC AACGACCCGA CGCTGCTGTT CATCAATGCG
GGCATGAACC AGTTCAAGGA TGTGTTTCTC GGTCGGGAAA AACGCGACTA TGTGCGCGCC
ACCTCGGCCC AGAAATGCGT GCGCGCCGGC GGCAAACATA ACGACCTGGA AAACGTCGGT
CAGACCGCCC GTCATCACAC CTTTTTTGAA ATGCTCGGCA ACTTCTCTTT CGGCGACTAC
TTCAAGAAAG AGGCCATCGA CCATGCCTGG AAGTTTCTCA CTGAAGAGAT GGGCCTGCCC
AAGGACAAAT TGTGGGTCAC CGTCTTTCGC GAGGACGACG AAGCATACGA TATCTGGCGC
GACCAGCAAG GTATCCCCGA AGAGCGCCTG ATCCGCATGG GCGAAAAGGA CAACTTCTGG
TCCATGGGCG ACACCGGCCC CTGCGGACCC TGTTCGGAAA TCCTCATCGA CCAGGGCGAA
TCCATGTCCT GCGGCGACGA GTGCGGTATC GGCAAATGCG ACTGCGACCG CTACCTGGAA
CTGTGGAACC TGGTGTTCAT GCAGTTCAAT CGCGACGCCG ACGGCACCAT GACCCCCCTG
CCCAAGCCGT CCATCGACAC CGGCATGGGG CTGGAGCGCA TCACCGCCGT CATGCAGGGC
GTGCAAAGCA ATTACGACTG CGACCTGCTG CGCGGCATCA TCGCCCATGT GGAAGAACTC
TCGGGCAAGC GCTACGGCGA CAATGCCGAG CACGACATGT CCATGCGGGT CATCGCAGAC
CACAGCCGCG CCACAGCGTT TCTCATTGCC GACGGCGTGC TGCCCAGCAA CGAAGGCCGC
GGCTACGTAT TGCGGCGCAT CATGCGCCGG GCCGCCCGTC ACGCCAAAAT GCTCGGGTTC
GCCGATCCGG TACTGTACCG CACGGCAACC TTCGTACTGC AATCGATGGC CGAAGCGTAC
CCCGAACCGG CCCAGCGTGC TGACTACGTC GCCAAGATCG TCAAGATCGA GGAAGAGCGT
TTTATCCAGA CCCTGGACAA CGGCCTGCGC ATCCTTACCG AGGAGGTCGA GCGCCTCAAA
GCGGCCAACG CCACCGTGCT GCCGGGCGAT GTAGCGTTTA AACTCTACGA CACTTTCGGC
TTTCCCCTTG ACCTTACCGC GGATATTTTA CGCGGCGAAA ACGTCACCAT CGACGAAGAC
GGTTTCGAAG CCTGCATGGA GGAACAGCGC CAGAAAGCCC GCGAGCACTG GAAAGGCTCC
GGCGAAGAAG CCATTTCCGG CATCTACCGG CAGCTTGCCG AGGAAGGCGC CCGCACCGAC
TTTACCGGCT ACGGCGAACT GACCGGCCAG AGCGAGATTC TCGCCATCCT CCTCGACGGC
CAACCGGTGT CCAGCGCACC GGCCGGAGCC AAAGTCGAAA TCGTCACCGC CGCCACGCCC
TTTTACGGGG AATCGGGTGG CCAGACCGGA GACTGCGGCA CCCTTGCCGC CGGCGATGCC
GAAGTCACCA TCACAGACAC CAAAAAACCG TTGCCGGAAT TATTCGTACA CGTGGGCGAA
ATTGCCGCCG GCACGCTGCA GACCGGCGAA ACCGCAACCC TGACGGTTGA CCGGGAGCGT
CGCCAGGCCA CGGCCCTCAA CCACACGGCC ACCCATCTGC TGCAGGCGGC CCTTGTCGAA
GTACTCGGCG AGCATGTCAA ACAGGCCGGA TCGCTGGTAA CCCCGGAGCG TCTGCGCTTC
GACTTTATCC ATTTCTCCGC CATGAGCGCC GAGGAATTGG AACGGGTCGA AACCCTGGTC
AATTGCCGTA TCCGGGAGAA CGCCGGAGTC GACACCCGCG AAATGGATCA CGAACAGGCC
GTTGCCGAGG GCGCCACCGC CCTGTTCGGC GAAAAATACG GCGACAAGGT CCGCGTCGTC
CGGGTCGGCG ACATCAGCAT GGAACTGTGC GGCGGCACCC ACGCCAACGC ATCCGGGGAT
ATCGGCCTGT TCAAAATCCT GCAGGAGACC GGCATCGCCG CCGGCGTACG ACGTATCGAA
GCGGTGACGG GGGCCAAAGC CCTCCAGGTG GTACGCGACC AGGAACGTAC CCTCGACGAT
CTGGCAAGCC TGATCAAAAC CGATCGTCCC CAACTGGAAG CACGCCTGCG CAAGCTGCTG
GAACGCCAGA AGGAACTGGA ACGCGAAATC GAATCCCTGC AGGGCAAGCT CAACGCCGAC
CAGGCCGGCG ATCTGCTGCA GCAGGCTACC GAGATCGACG GCATCAGCGT GGTTTGCGGC
CGTGTCGACA ACCTCGACGG CAAGGCTTTG CGGGAACTTG CCGATCAGGT CCGTGACCGA
CTGTCATCAG GCGTCCTGAT TCTGGGCAGT GCCCACGAAG GCAAGGCCGG GCTTCTGGTA
GCAGTCACCA AGGATCTGAC CAAGCGGCTG CAGGCCGGCG CACTGGTCAA ACAACTGGCC
GCCATGGTCG GTGGTGGCGG CGGCGGGCGA CCCGACCTGG CTCAGGCCGG CGGCAGCAAG
CCCGAACAAC TTGACGAGGC CCTGGCCAGC GTACCGCAAC GCATCTCCGA AGCCCTTAAC
GCGGCCTGA
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| Protein sequence | MTGNEIRSRF LKFFQDHGHT VVPSSALIPH NDPTLLFINA GMNQFKDVFL GREKRDYVRA
TSAQKCVRAG GKHNDLENVG QTARHHTFFE MLGNFSFGDY FKKEAIDHAW KFLTEEMGLP
KDKLWVTVFR EDDEAYDIWR DQQGIPEERL IRMGEKDNFW SMGDTGPCGP CSEILIDQGE
SMSCGDECGI GKCDCDRYLE LWNLVFMQFN RDADGTMTPL PKPSIDTGMG LERITAVMQG
VQSNYDCDLL RGIIAHVEEL SGKRYGDNAE HDMSMRVIAD HSRATAFLIA DGVLPSNEGR
GYVLRRIMRR AARHAKMLGF ADPVLYRTAT FVLQSMAEAY PEPAQRADYV AKIVKIEEER
FIQTLDNGLR ILTEEVERLK AANATVLPGD VAFKLYDTFG FPLDLTADIL RGENVTIDED
GFEACMEEQR QKAREHWKGS GEEAISGIYR QLAEEGARTD FTGYGELTGQ SEILAILLDG
QPVSSAPAGA KVEIVTAATP FYGESGGQTG DCGTLAAGDA EVTITDTKKP LPELFVHVGE
IAAGTLQTGE TATLTVDRER RQATALNHTA THLLQAALVE VLGEHVKQAG SLVTPERLRF
DFIHFSAMSA EELERVETLV NCRIRENAGV DTREMDHEQA VAEGATALFG EKYGDKVRVV
RVGDISMELC GGTHANASGD IGLFKILQET GIAAGVRRIE AVTGAKALQV VRDQERTLDD
LASLIKTDRP QLEARLRKLL ERQKELEREI ESLQGKLNAD QAGDLLQQAT EIDGISVVCG
RVDNLDGKAL RELADQVRDR LSSGVLILGS AHEGKAGLLV AVTKDLTKRL QAGALVKQLA
AMVGGGGGGR PDLAQAGGSK PEQLDEALAS VPQRISEALN AA
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