| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2401 |
|---|
| Symbol | |
|---|
| ID | 3725103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 2826484 |
|---|
| End bp | 2827668 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637752012 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_357810 |
|---|
| Protein GI | 77919995 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1641] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00299] conserved hypothetical protein TIGR00299 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGT TGTTTCTGGA TACCTTCGCA GGCATTTCCG GCGACATGTT TCTCGGCCTG
CTGGTCGATC TGGGCGTTCC GCTACCCTCT ATTCAAGAGG GATTGGACAG GCTGCCGGTG
ACGGGCTACC AACTGCACCA GCAGCGCACC GAGCGCCAGC ACGTGGCCGC GTGCAAAATC
ATTGTTGAAC ACGAGGAACA ACACCATCAC CGCACCTGGC GAGACATCGA CCGCATGCTG
GCCGAAAGTT CCCTTAAACC AACCGTGGTC GATCTTGCCC GCCGTATCTT TCGCCGCATC
GGCGAAGCTG AGGCGAAAAT CCACGGCCGC GCCCTGGACG AAGTGCATTT CCATGAAGTC
GGCGCCATCG ACTCCATTGT CGATATCGTC GGCGCCGCCG TCGGCCTCGA CTACCTGCAT
CCCGACCGGA TCGTTTGCGC CCCCCTGCCC CTGACCCGCG GCACCGTGCA CTGTGCGCAC
GGCAGTTTTC CGCTGCCGGC TCCGGCCACC CTGGAAATCT TGCGTGGACT GCCCACCGTC
GGCGATACAG CCGAAGTGGA ACTGGTCACC CCGACCGGCG CGGCCATTGC CGCCGAAACC
GCCGAGTTCG GCGACCTGCC CGCCATGACC CTGGAACGCG TCGGTTATGG CGCCGGTGAC
CGCCAGCTCA GCGACCGCCC CAATCTGCTG CGCGGCCTGT TGGGAACAGC CGACGATCCC
TGGGAAGGCG AAACGGACCG CATCACCATT CTGGAGTGCC ACCTTGACGA TGCCAATCCG
GAGTGGCTCG GCGCACTGAT GGAACATTTG CTCGAAGAAG GGGCACTGGA CGTCGCCTTC
GCCCCTTTGC AGATGAAGAA GAACCGGCCC GGTGTACACC TGACGGTACT GGCACCGCAG
GATAAAACGG TTGCTCTCGC CCGCCGCATT CTGCGCGAGA GCACGGCCGG CGGCCTGCGC
TACCAGGAAG CCACCCGGTT CAAACTGCGC CGCCAGATCG AGCGTCTGAC CACGCCTCTA
GGCGAGGTAC ACATCAAGCT TTTTTACGAG GGCGACAAAC TGTTACGGCT GGCTCCCGAA
TTCGACAGCT GCCAGAAACT GGCACAAAGC AGCGGGCTGC CACTACCCGA GATCTACCGT
CTGGCGGAAC AGACCGCCTA CGACTTTTTC CGCAAGAAAG GTTGA
|
|---|
| Protein sequence | MSLLFLDTFA GISGDMFLGL LVDLGVPLPS IQEGLDRLPV TGYQLHQQRT ERQHVAACKI
IVEHEEQHHH RTWRDIDRML AESSLKPTVV DLARRIFRRI GEAEAKIHGR ALDEVHFHEV
GAIDSIVDIV GAAVGLDYLH PDRIVCAPLP LTRGTVHCAH GSFPLPAPAT LEILRGLPTV
GDTAEVELVT PTGAAIAAET AEFGDLPAMT LERVGYGAGD RQLSDRPNLL RGLLGTADDP
WEGETDRITI LECHLDDANP EWLGALMEHL LEEGALDVAF APLQMKKNRP GVHLTVLAPQ
DKTVALARRI LRESTAGGLR YQEATRFKLR RQIERLTTPL GEVHIKLFYE GDKLLRLAPE
FDSCQKLAQS SGLPLPEIYR LAEQTAYDFF RKKG
|
|---|
| |