| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2388 |
|---|
| Symbol | |
|---|
| ID | 3725090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 2813013 |
|---|
| End bp | 2814257 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637751999 |
|---|
| Product | flavoprotein-containing dehydrogenase |
|---|
| Protein accession | YP_357797 |
|---|
| Protein GI | 77919982 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.0523144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGAGG ATACGCCATC CGTTTCGGCG ACTTTGGTTG ACCTGAAACA GCAGTCGATT
GAAACTCTTC CGGTTCAGAC CTGGGATGTT ATCATCGCCG GTGCCGGACC GGCCGGGAGT
ATCGCGGCCA TTACCCTGGC CGACATGGGG CACCGTGTTC TGTTGACTGA TCGGGACTGG
TTTCCGCGCA GTAAGGTCTG CGGGGATTGT CTCACTCCAG GCGCCATGCG CATATTGCGG
CGTTACGGGC TTTTCGATGC AGCGCTTCAT GCAGGCCACC GTTGCACGCA GATGCGTATT
TACAGTCCGG CACATGTGCG TATCGATGTC CCCGGCGATT ACCTTACCGT AAAACGTGAA
ATTCTCGATC AGTTGTTGGC CAGAAAGGCT TTGGCTGCCG GGGTTACTTT TGTCAGGGGG
ACCGCCGCAG CCCTGGAAAA ACGTGGCGAC GCAGAAATTG CGGTGCGTTT CAGGGAAGGC
CCTTCCATGC AGGTAGCGCG CTGCGGCCTG TTGGCTACAG GCGGACGGTT GGCATTGGCG
CAAAAAAGCG GCCTCGTGGC CCACCCTGTG GCCAGTGGCG CGGCCGTACG TTGTTATGTC
CGATCCCGTC TGCCTATTAA GCATATGGTC ATTGCCTGTG AGCGCACCAT TCTGCCCGGG
TATGCCTGGA TCTTTCCTGT CGAAAAAGAT TTATACAATG TGGGCTGTGG TCGGTTCATG
TATCGTCAAA CCGAGCCTCA CCTCCACCTT AAACGTTCTT TCCACGCATT TCTCCATACG
TTTCCGATAG CGCGCGAATT GATGGAACAG GGGGATATGG AGACGCCGCT TAAGGGGGCT
GTGTTGCGCA GCGGTTGGCA GCATATAGGT CCCATGGCCT CCGGGGCCTG CCTCGGTATG
GGGGAAATGG TCGGCACCAC CTCGCCATAT ACGGGTGAAG GCATCGGCAA GGCCATGCAA
AGCGGTGTGC TGGCAGCGAA ACTTGTGCAT CGTTGCCTGC GGAAAGGTGA CATGTCGGAG
TTGCTTCGCT ATCCCGGGTA TCTCCGGCTT TTACGCGGAA TGTGTTATGA CGGTTTTGAG
CGTACCCGCA AATGGTTCGA ACACCCCCTG TTGGTCGACT TTCTAGCCCA CCGCATCAAT
CACAGTCCTT ATCTGTATGA TCGTTTCACA GCCGTCCTGC AGGAAAAAAA CGACCCCGCC
CAGGTTTTTT CCTGGTGCGG GGTCTTGCGA TCTCTGTGGC GCTGA
|
|---|
| Protein sequence | MGEDTPSVSA TLVDLKQQSI ETLPVQTWDV IIAGAGPAGS IAAITLADMG HRVLLTDRDW
FPRSKVCGDC LTPGAMRILR RYGLFDAALH AGHRCTQMRI YSPAHVRIDV PGDYLTVKRE
ILDQLLARKA LAAGVTFVRG TAAALEKRGD AEIAVRFREG PSMQVARCGL LATGGRLALA
QKSGLVAHPV ASGAAVRCYV RSRLPIKHMV IACERTILPG YAWIFPVEKD LYNVGCGRFM
YRQTEPHLHL KRSFHAFLHT FPIARELMEQ GDMETPLKGA VLRSGWQHIG PMASGACLGM
GEMVGTTSPY TGEGIGKAMQ SGVLAAKLVH RCLRKGDMSE LLRYPGYLRL LRGMCYDGFE
RTRKWFEHPL LVDFLAHRIN HSPYLYDRFT AVLQEKNDPA QVFSWCGVLR SLWR
|
|---|
| |