Gene Pcar_2380 details

Gene Information

• Locus tag: Pcar_2380
• Symbol: recQ
• ID: 3725082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2803154
• End bp: 2804944
• Gene Length: 1791 bp
• Protein Length: 596 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637751991
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_357789
• Protein GI: 77919974
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000000212665
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTCAG ATCCCCTCGA TATATTGAAG CGTGTTTTCG GATTTCAATC CTTTCGTCCT 
TTGCAGGAAG AAATCGTCGC CCGCATCCTT GATGGGCAGG ATGCCTTCGT GCTGATGCCC 
ACCGGTGGCG GTAAGTCCCT GTGTTTTCAA TTGCCGGCGT TGCTGCGGCA AGGTGTCGGT 
ATTGTCGTTT CACCGCTGAT TTCCCTGATG AAGGATCAGG TCGATGCCCT GCGTGCCAGT 
GGCGTCCGAG CTGCCTATTA CAATTCTTCC TTGGGCCAGA AGGCTGCTCG TCAGGTGCTG 
GCCGAGTTGC ATGCCGGCCA GCTCGATCTT CTTTATATCG CTCCGGAACG GTTGATGAGT 
CCCGGATTTC TCGAGCGCCT GCGGGACATG GACGTTGCCT TGATCGCTAT TGATGAAGCG 
CATTGCATCT CTCAATGGGG TCACGATTTC AGGCCGGAAT ATACCCAGTT GGGAGTGCTG 
CGCCGATCCT TTCCCGGTGT GCCCCTGGTG GCCTTGACTG CCACTGCCGA TGTACAGACC 
CGTCAAGATA TTCTGTCGCG TCTGGAGCTT GACGATGACG ATTGTTTTGT CACCAGTTTT 
GATCGGCCCA ATATTCGCTA TACGGTTTTG GAAAAACATC AGCCGGCCAG GCAGCTTATG 
AAATTTCTTG CAGGGCACGG CAGCGAGGCC GGGATCGTCT ATGCCTTGAG TCGCAAGCGC 
GTAGAAGAGG TCGCGAAGAA ACTTTGCGAC GCAGGATTGT CGGCCGCAGC TTACCATGCC 
GGTCTCGGTG ATGGCGAAAG ACAGCGGGTG CAGGACGAGT TTTTGCGGGA CGAGCTACAG 
ATCGTGGTAG CGACGGTAGC TTTTGGCATG GGGATCGATA AATCCAATGT TCGGTTTGTC 
GTGCATTACG ATCTGCCCAA AAATATCGAG GGGTATTATC AGGAAACCGG TCGCGCCGGT 
CGCGACGGAC TTGCGGCGGA GGCCCTGTTG TTGTTCGGTT ACGGGGATAT TGCCCTGTGT 
CGGGGGTTGA TCGAAAAAGG CCATAACGAG GAGCAGAACC GTATAGAGTT GCACAAGCTC 
AATGCTATGG CCTCTTTTGC CGAAGCGCTC ACCTGCCGCC GCCAGGTGTT GCTGGGTTAT 
TTCGGTGAAC ATGCCACCGA GGATTGCGGC AATTGCGATA TCTGTCTGCA GCCACCCGAA 
ACCTACGATG CGACGGAAGA CGCGCGCAAA GCATTGTCGT GCGTGTACCG GGTCGGTCAG 
CGATTCGGCG CCGGGCATGT TATCGACGTA CTGCGCGGTA CCCGCAATGA GCGCATGCTC 
CGGTTGGGAC ATGATCGTCT GTCCACCTAC GGTATTGGTG CCGATGTCAG TCGCGATGCC 
TGGGGCAGCC TTGTGCGTCA ATTGGTGCAT CGCGGTTATC TGTATCAGGA CGTGGGGAAT 
TATTCGGTGC TGCGCTTGAC GGAAAAGGCG CGTCCTTTGC TGCGTGGCGA AATAACCCTG 
CAACTTGCCA AACCGCGCAT CAAGGTAAAG GCGGTTAAAA AGCCTTCGTC CCGGAGTGCC 
AGCGAGTGGT CGTACGATGT CGCTTTGTTT GACGCGCTGC GAACATTGCG TAAGCAGATA 
GCGGATCATG AACACGTGCC GCCTTTCGTG GTGTTTTCCG ATGCCACCCT TGCGGAAATG 
GCCGCTCGGA GACCGCGGGA TGAAGCGGCA TTGCTCTCCG TTAACGGCGT CGGCCAACGT 
AAATTACAGC GGTACGGCGA GGACTTTTTG GCCCTGTTGA TCGATTACTG A 

 

Protein sequence

MPSDPLDILK RVFGFQSFRP LQEEIVARIL DGQDAFVLMP TGGGKSLCFQ LPALLRQGVG 
IVVSPLISLM KDQVDALRAS GVRAAYYNSS LGQKAARQVL AELHAGQLDL LYIAPERLMS 
PGFLERLRDM DVALIAIDEA HCISQWGHDF RPEYTQLGVL RRSFPGVPLV ALTATADVQT 
RQDILSRLEL DDDDCFVTSF DRPNIRYTVL EKHQPARQLM KFLAGHGSEA GIVYALSRKR 
VEEVAKKLCD AGLSAAAYHA GLGDGERQRV QDEFLRDELQ IVVATVAFGM GIDKSNVRFV 
VHYDLPKNIE GYYQETGRAG RDGLAAEALL LFGYGDIALC RGLIEKGHNE EQNRIELHKL 
NAMASFAEAL TCRRQVLLGY FGEHATEDCG NCDICLQPPE TYDATEDARK ALSCVYRVGQ 
RFGAGHVIDV LRGTRNERML RLGHDRLSTY GIGADVSRDA WGSLVRQLVH RGYLYQDVGN 
YSVLRLTEKA RPLLRGEITL QLAKPRIKVK AVKKPSSRSA SEWSYDVALF DALRTLRKQI 
ADHEHVPPFV VFSDATLAEM AARRPRDEAA LLSVNGVGQR KLQRYGEDFL ALLIDY