Gene Pcar_2375 details

Gene Information

• Locus tag: Pcar_2375
• ID: 3725077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 2797517
• End bp: 2798206
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637751986
• Product: ABC-type transport system, ATPase component
• Protein accession: YP_357784
• Protein GI: 77919969
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0000000797432
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCTTA TCGAACTGAC CGACGTCGAA AAAATCTACC CACTGGGCAA CCAGCAGGTC 
ACCGCCTTGT CCGAATTCAG CCTGTCCATC GACAAAGGCG AATTCACGGT GCTGGCCGGG 
CCGTCCGGCA GCGGTAAAAC GACCGTTCTC AATCTGGTCG GCGGCATCGA TCAACCGACG 
GCGGGAACCG TCAGGATCGA AGGACGCGAT GTCGGGCCCC TCGATCCGCG TGCCCTGGCG 
GATTTCAGAT TGCATCATAT CGGCTTCATC TTTCAATCCT ACAACCTTAT CCCCGTTCTG 
ACCGCTGCGG AAAATGCCGA ATTCACCCTC ATGCTGCAGG GCGTTGCCAA AGCCACGCGG 
CGCAACCGCA TCCGTGAATT ATTCAAGGAA CTGGGTATTG CCGGTCTGGA AAACCGCAAG 
CCGAGGGACC TGTCCGGAGG GCAACAACAA CGGGTCGCCA TTGCCCGCGC CATGGCCCCG 
CAGCCCACGG TGATTCTGGC CGACGAACCC ACCGCCAACC TCGACTCCCA GACCGCCGAA 
GAACTGCTCG ACCTGATGTA TCGGCTCAAT ACCCAGCGCC ACACGACCTT CATTTTCAGC 
TCCCACGACC CCTTGGTGAT TTCGCGGGCA CGCAGAATCA TTCGGCTTAG GGATGGCCGG 
CTTGAAGATG ATCGAAAGCA GCAGCGATGA 

 

Protein sequence

MPLIELTDVE KIYPLGNQQV TALSEFSLSI DKGEFTVLAG PSGSGKTTVL NLVGGIDQPT 
AGTVRIEGRD VGPLDPRALA DFRLHHIGFI FQSYNLIPVL TAAENAEFTL MLQGVAKATR 
RNRIRELFKE LGIAGLENRK PRDLSGGQQQ RVAIARAMAP QPTVILADEP TANLDSQTAE 
ELLDLMYRLN TQRHTTFIFS SHDPLVISRA RRIIRLRDGR LEDDRKQQR