| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2350 |
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| Symbol | |
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| ID | 3725052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2760139 |
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| End bp | 2761701 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637751961 |
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| Product | phosphodiesterase |
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| Protein accession | YP_357759 |
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| Protein GI | 77919944 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000000201473 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTATAG AAATTCAGTG GATAGGAATC GGCGCGGCAT TTTTGGTCGG TGCCATCGGC
GGGGCACTTG TACGCCGCAA GGTTGCGGCT ACCCAATTGG CTGAAGCGAA AAGAATGGCT
GACCAGATTC TGTCGGAAGC CACCAAGGAA GCGGATATTC TCCGCAAAGA AGCCGAAATT
CAGAAAAAGG ATGCCTTGCT GGAAGCAAAG ACGGCCTGGG AGCAAGAGGC CCGTGAGATG
CGCCGGGAAT TGCAGGCACA GGAGAAGCGT CTTGTGCAGC GCGAGGAAAA TCTGGATCGC
AAGGTTGCGC AGGTCGATGC GCGCGATGAA GAGTTCGGGC AGCGTGAAAA GCGTCTTTCG
CAACAGGAAA GCCGCATTCG CAGCTGGGAA AAGGAAGCGG ATGCTCTGGT CCGCCAGCAA
CGTGAGCGGC TCGAGGAGCT GGCCGGGTTG GGCGCCGAGG AGGCCAAGGC GCAACTCATG
GAGCAGATGG AGAGTGAGGC GCGGCACGAG TGCGCCAAAA AAATCAAGCA GATCGAGGAT
GAAGCCAAGG AAGCCGCAGA TAAAAAAGCG CAGGAGATTC TGGCTCTCGC CGTGCAACGC
TATGCCGGTG ATTTTGTCGC AGAAAGCGCC GTTAGCGTCG TGCCGTTGCC CAATGATGAA
ATGAAAGGGC GCATTATCGG TCGGGAGGGA CGTAATATCC GTGCCATTGA AGCGGCCACC
GGTATCGATC TGATTATCGA TGATACTCCC GAAGCCGTTA TTATTTCCGG ATTTAACCCC
GTTCGGCGCG AGGTTGCACG GTTGGCTCTG GAGCGGCTCA TCGGGGATGG TCGCATTCAT
CCGTCGCGTA TCGAGGAAGC GGTAAACAAG GCCACCCAGG ATGTCGACAA CGCCATTCGC
GAGGCTGGCG AACAAGCGAC TTTCGATGTT GGCGTGCATG GGATTCATCC CGAGATTATC
AAGCTTATCG GGCGCCTGCG CTATCGTACT TCTTACGGGC AGAACGTGCT TCAGCATTCC
ATCGAAGTTG CTTTCTTGTG CGGTATCATG GCCGCCGAGC TTGGCATCAA TGTCAAGCAG
GCCAAGCGGG CCGGATTGCT GCATGATATC GGCAAGGCCG TCGACCACGA AGTGGAAGGT
TCGCATGCCG TCATCGGGGC CAATCTTGCG CGTAAGTATG GCGAATCGGC CAAGATCGTT
CATGCTCTGG CTGCCCATCA TGAGGACGAG AAGCCTTCGA CGGTTCTTGC CGTGCTGGTT
CAGGCGGCCG ATGCTCTCTC CGGTGCGCGC CCCGGTGCCC GTCGTGAAAT GCTTGAAACC
TACGTTAAGC GACTTCAGGA CTTGGAGCGT ATCGGGACCT CCTTTGCCGG CGTTACCAAC
TGTTATGCCA TCCAGGCCGG TCGTGAAATC CGGGTTATGG TTTCCAGCGA AGAAGTGTCG
GATGTTCAGT CCCATACCCT GGCCAAGCAG ATTGCGCGAC AGATCGAGGA GGAGATGGCT
TATCCCGGTC AGATCAAGAT TAACGTCATT CGCGAAACCA GGGCGGTGGA GTTTGCCAAA
TAG
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| Protein sequence | MSIEIQWIGI GAAFLVGAIG GALVRRKVAA TQLAEAKRMA DQILSEATKE ADILRKEAEI
QKKDALLEAK TAWEQEAREM RRELQAQEKR LVQREENLDR KVAQVDARDE EFGQREKRLS
QQESRIRSWE KEADALVRQQ RERLEELAGL GAEEAKAQLM EQMESEARHE CAKKIKQIED
EAKEAADKKA QEILALAVQR YAGDFVAESA VSVVPLPNDE MKGRIIGREG RNIRAIEAAT
GIDLIIDDTP EAVIISGFNP VRREVARLAL ERLIGDGRIH PSRIEEAVNK ATQDVDNAIR
EAGEQATFDV GVHGIHPEII KLIGRLRYRT SYGQNVLQHS IEVAFLCGIM AAELGINVKQ
AKRAGLLHDI GKAVDHEVEG SHAVIGANLA RKYGESAKIV HALAAHHEDE KPSTVLAVLV
QAADALSGAR PGARREMLET YVKRLQDLER IGTSFAGVTN CYAIQAGREI RVMVSSEEVS
DVQSHTLAKQ IARQIEEEMA YPGQIKINVI RETRAVEFAK
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