Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2335 |
Symbol | |
ID | 3725027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2731288 |
End bp | 2732034 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637751936 |
Product | hypothetical protein |
Protein accession | YP_357744 |
Protein GI | 77919929 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.000225431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGTC ATAGTAAATG GGCCAATATC AAGCACCGCA AAGGCGCTCA GGACGCCAAA CGGGGCAAGA TTTTCACCAA GCTGATCAAG GAAATTACCG TCGCGGCCAA AATCGGCGGC GGCGACCTGG AGGCCAATGC CCGCCTCCGT CTGGCGGTTG ACAAAGCCAA ACAGGCTAAT ATGCCGAAGG ATAATATCGA AAGGGCTATC AAAAAAGGGA CCGGCGACCT GGACGGCGTC ACTTACGAAG AGGGGACCTT TGAAGGTTAC GGTCCCGGGG GTGTTGCGGT CATCGTCGAA TTCATGACGG ATAACCGGAC CCGGACCGTG GCCGACGTCC GTCACTCTTT TAACAAATTC GGCGGAAGTC TCGGGGTCAG CGGTTCCGTC GCCTTCATGT TCGATCGCAA GGGACAGATC ATCTTCGGCG AAAACAGCGA CTTTGAGAAG ATTTTCGAAG TGGCCCTGGA AGCCGGCGCA GAAGACGTTA ACGACGAAGA CGGTGTCACC GAAGTCATTA CCGCCCCGGC GGACTTTGAA ACCGTCCGCA ATACTCTGGC AGAGCAGGGT TTAACCCCGG AATCGGCCGA AGTCACCATG ATTCCGCAGA ACATGACCGC GGTTGAAGGC AAGCAGGCCG AATCGTTGAT GAAAATGATC GACATGCTGG AAGATAATGA CGACGTCCAG AACGTCTTTG CAAACTTCGA TATTTCCGAC GAGGAAATGG CCCGCATTAT GGGATAA
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Protein sequence | MAGHSKWANI KHRKGAQDAK RGKIFTKLIK EITVAAKIGG GDLEANARLR LAVDKAKQAN MPKDNIERAI KKGTGDLDGV TYEEGTFEGY GPGGVAVIVE FMTDNRTRTV ADVRHSFNKF GGSLGVSGSV AFMFDRKGQI IFGENSDFEK IFEVALEAGA EDVNDEDGVT EVITAPADFE TVRNTLAEQG LTPESAEVTM IPQNMTAVEG KQAESLMKMI DMLEDNDDVQ NVFANFDISD EEMARIMG
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